RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 SYCNQ0VAF6 134 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 A0A0J9YXY3 114 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 DOPEY1Q5JWR5 2465 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 PIK3CD-AS1Q5SR53 167 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 FAM167A-AS1Q96KT0 104 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 LINC00574Q9H8X3 128 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 C19orf71A6NCJ1 209 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
USP3-201ENST00000268049 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 PATE2Q6UY27 113 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 MIR7-3HGQ8N6C7 128 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 TLN2Q9Y4G6 2542 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 TRBV27A0A0K0K1C4 114 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 MAPKAPK5-AS1Q8N8E1 139 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 USP9YO00507 2555 aaPredicted RBP5.81□□□□□ -1.48
USP3-201ENST00000268049 LINC00336Q6ZUF6 198 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 FAM19A3Q7Z5A8 133 aa5.81□□□□□ -1.48
USP3-201ENST00000268049 VPREB1P12018 145 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 USP9XQ93008 2570 aaPredicted RBP5.8□□□□□ -1.48
USP3-201ENST00000268049 C5orf42Q9H799 3197 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 SOSTDC1Q6X4U4 206 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 ABCA12Q86UK0 2595 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 TRBV6-4A0A1B0GX49 114 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 MDFICQ9P1T7 246 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 TRBV6-1A0A0K0K1D8 114 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 NCR3O14931 201 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
USP3-201ENST00000268049 DIRC1Q969H9 104 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 BRCA2P51587 3418 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 IGLV1-51P01701 117 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 FHL3Q13643 280 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 C6orf223Q8N319 242 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 C11orf1Q9H5F2 150 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 K7ERS5 55 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 MDFIQ99750 246 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 Q6JHZ5 121 aa5.79□□□□□ -1.48
USP3-201ENST00000268049 CPAMD8Q8IZJ3 1885 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 IGLV4-69A0A075B6H9 119 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 AVPP01185 164 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 IGLV2-8P01709 118 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 MYO9AB2RTY4 2548 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 NEXN-AS1Q8NBZ9 246 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 ZNF580Q9UK33 172 aa5.78□□□□□ -1.48
USP3-201ENST00000268049 LST1O00453 97 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 PROK1P58294 105 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 UNQ9165/PRO28630Q6UXU0 137 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 Q6ZTI0 123 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 WNK1Q9H4A3 2382 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 NACAE9PAV3 2078 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 CHCHD10Q8WYQ3 142 aaPredicted RBP5.77□□□□□ -1.49
USP3-201ENST00000268049 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
USP3-201ENST00000268049 TRAV7A0A075B6U4 112 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 LY6LH3BQJ8 138 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 MRGPRG-AS1Q2M3A8 158 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 EXPH5Q8NEV8 1989 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 PRR4Q16378 134 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 CCDC140Q96MF4 163 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 PLAC8L1A1L4L8 177 aa5.76□□□□□ -1.49
USP3-201ENST00000268049 SLPIP03973 132 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 H0Y9J4 135 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 IGLV1-40P01703 118 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 COX7BP24311 80 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 CRIP3Q6Q6R5 217 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 F8WDY8 70 aa5.75□□□□□ -1.49
USP3-201ENST00000268049 TMEM223A0PJW6 202 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 BRI3O95415 125 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 C1orf158Q8N1D5 194 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 POLQO75417 2590 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 LINC00308Q8TCZ7 52 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 HECTD1Q9ULT8 2610 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 IGKV1D-37A0A075B6S9 117 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 ARHGAP32A7KAX9 2087 aa5.74□□□□□ -1.49
USP3-201ENST00000268049 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 A0A0C4DFX4 3053 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 IGLV2-14P01704 120 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 ZNF292O60281 2723 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 ZNF22P17026 224 aaPredicted RBP5.73□□□□□ -1.49
USP3-201ENST00000268049 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 ZFAND2AQ8N6M9 145 aa5.73□□□□□ -1.49
USP3-201ENST00000268049 PSPHP1O15172 72 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 E7EUB6 86 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 PCSK5Q92824 1860 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 DSCAML1Q8TD84 2053 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 PRUNE2Q8WUY3 3088 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 Q6ZTC4 211 aa5.72□□□□□ -1.49
USP3-201ENST00000268049 A0A087WVE0 104 aa5.71□□□□□ -1.49
USP3-201ENST00000268049 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.49
USP3-201ENST00000268049 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
USP3-201ENST00000268049 LINC00310P59036 64 aa5.71□□□□□ -1.5
USP3-201ENST00000268049 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
USP3-201ENST00000268049 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
USP3-201ENST00000268049 C10orf99Q6UWK7 81 aa5.71□□□□□ -1.5
USP3-201ENST00000268049 CDIP1Q9H305 208 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms