RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 PLAC8L1A1L4L8 177 aa4.06□□□□□ -1.76
XRN1-201ENST00000264951 A6NDX4 124 aa4.06□□□□□ -1.76
XRN1-201ENST00000264951 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
XRN1-201ENST00000264951 Q8N6K4 173 aa4.06□□□□□ -1.76
XRN1-201ENST00000264951 PLA2G2EQ9NZK7 142 aa4.06□□□□□ -1.76
XRN1-201ENST00000264951 USP9XQ93008 2570 aaPredicted RBP4.06□□□□□ -1.76
XRN1-201ENST00000264951 WDR90Q96KV7 1748 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 DEFB136Q30KP8 78 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 DENND4CQ5VZ89 1909 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 KLLNB2CW77 178 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 ZNF702PQ9H963 129 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 FRMPD3Q5JV73 1810 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 IGHV4-30-2A0A087WSY4 118 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 Q6ZTI0 123 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 JMJD1CQ15652 2540 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 NUP210Q8TEM1 1887 aaPredicted RBP4.05□□□□□ -1.76
XRN1-201ENST00000264951 ZNF503-AS2A6NEH8 195 aa4.05□□□□□ -1.76
XRN1-201ENST00000264951 NHLRC4P0CG21 123 aaPredicted RBP4.05□□□□□ -1.76
XRN1-201ENST00000264951 TSHBP01222 138 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 MAPKAPK5-AS1Q8N8E1 139 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 TANC1Q9C0D5 1861 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 RETNLBQ9BQ08 111 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 Q8N2B8 174 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 CYP4F30PQ9H0H9 118 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 C2orf16Q68DN1 1984 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 IGLV2-14P01704 120 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 SLPIP03973 132 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 GDF5OSQ5U4N7 250 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 IGHV4-61A0A0C4DH41 118 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 DEFB131BA0A096LNP1 70 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 DEFB114Q30KQ6 69 aa4.04□□□□□ -1.76
XRN1-201ENST00000264951 H0Y9P7 68 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 PRM2P04554 102 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 ACYP2P14621 99 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 C2orf48Q96LS8 159 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 PLA2G2CQ5R387 149 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 DNAJC9-AS1A6NH13 148 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 A8MZ25 164 aa4.03□□□□□ -1.76
XRN1-201ENST00000264951 CEMP1Q6PRD7 247 aaPredicted RBP4.03□□□□□ -1.76
XRN1-201ENST00000264951 IGHV4-38-2P0DP08 117 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
XRN1-201ENST00000264951 PRR4Q16378 134 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 SOSTDC1Q6X4U4 206 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 POLQO75417 2590 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 UNQ9165/PRO28630Q6UXU0 137 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 E7EUB6 86 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 PSPHP1O15172 72 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 IGIPA6NJ69 53 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 A0A1B0GU69 56 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 Q8N7P7 452 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
XRN1-201ENST00000264951 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 TP53TG3Q9ULZ0 132 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
XRN1-201ENST00000264951 ZNF580Q9UK33 172 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 SHISA2Q6UWI4 295 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 A0A1B0GUV1 79 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 IGLV2-11P01706 119 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 REG3GQ6UW15 175 aa4.01□□□□□ -1.77
XRN1-201ENST00000264951 LY6G6EA0A0G2JKS1 128 aa4□□□□□ -1.77
XRN1-201ENST00000264951 C22orf34Q6ZV56 151 aa4□□□□□ -1.77
XRN1-201ENST00000264951 DCANP1Q8TF63 244 aa4□□□□□ -1.77
XRN1-201ENST00000264951 U3KQA8 63 aa4□□□□□ -1.77
XRN1-201ENST00000264951 A0A096LNI7 61 aa4□□□□□ -1.77
XRN1-201ENST00000264951 BRI3O95415 125 aa4□□□□□ -1.77
XRN1-201ENST00000264951 IGKV2-28A0A075B6P5 120 aa4□□□□□ -1.77
XRN1-201ENST00000264951 IGKV2D-28P01615 120 aa4□□□□□ -1.77
XRN1-201ENST00000264951 FRMD6-AS1P0C7T7 363 aa4□□□□□ -1.77
XRN1-201ENST00000264951 MKI67P46013 3256 aaKnown RBP4□□□□□ -1.77
XRN1-201ENST00000264951 C1orf64Q8NEQ6 169 aa4□□□□□ -1.77
XRN1-201ENST00000264951 USP9YO00507 2555 aaPredicted RBP3.99□□□□□ -1.77
XRN1-201ENST00000264951 Q6ZTC4 211 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 A0A0J9YWU9 116 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
XRN1-201ENST00000264951 RITA1Q96K30 269 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 AMELXQ99217 191 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 KIAA1671Q9BY89 1806 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 CYSRT1A8MQ03 144 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 CD164Q04900 197 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 LINC00242Q5T6M2 205 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
XRN1-201ENST00000264951 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 Q6YL49 198 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 LOC100131303A0A0U1RQF7 123 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 ZNF843Q8N446 348 aa3.99□□□□□ -1.77
XRN1-201ENST00000264951 POM121L12Q8N7R1 296 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 ALPK3Q96L96 1907 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 PSMG3-AS1Q96PY0 264 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 SPTBN4Q9H254 2564 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 LAMA3Q16787 3333 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 KPRPQ5T749 579 aaPredicted RBP3.98□□□□□ -1.77
XRN1-201ENST00000264951 MAPK1IP1LQ8NDC0 245 aa3.98□□□□□ -1.77
XRN1-201ENST00000264951 CRIP1P50238 77 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms