RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SPINK13Q1W4C9 94 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 PFN2P35080 140 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 COX6A2Q02221 97 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 LINC00467Q9BRT7 94 aa9.44□□□□□ -0.9
NUP54-201ENST00000264883 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.44□□□□□ -0.92e-7■■■■■ 42.4
NUP54-201ENST00000264883 OBSCN-AS1Q96MR7 158 aa9.43□□□□□ -0.9
NUP54-201ENST00000264883 PRO0628Q9UI54 55 aa9.43□□□□□ -0.9
NUP54-201ENST00000264883 TRAV13-2A0A0B4J235 113 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 EDN2P20800 178 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 CELSR1Q9NYQ6 3014 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 A0A087WYN8 130 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 PF4P02776 101 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 MSMBP08118 114 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
NUP54-201ENST00000264883 A8MTW9 85 aa9.41□□□□□ -0.9
NUP54-201ENST00000264883 GHRHP01286 108 aa9.41□□□□□ -0.9
NUP54-201ENST00000264883 CRPP02741 224 aa9.41□□□□□ -0.9
NUP54-201ENST00000264883 Q9UF83 564 aa9.41□□□□□ -0.9
NUP54-201ENST00000264883 ZANQ9Y493 2812 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 B4DSR2 109 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 DEFB113Q30KQ7 82 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
NUP54-201ENST00000264883 RBMY1BA6NDE4 496 aaKnown RBP9.39□□□□□ -0.91
NUP54-201ENST00000264883 RBMY1EA6NEQ0 496 aaKnown RBP9.39□□□□□ -0.91
NUP54-201ENST00000264883 RBMY1DP0C7P1 496 aaKnown RBP9.39□□□□□ -0.91
NUP54-201ENST00000264883 RBMY1A1P0DJD3 496 aaKnown RBP9.39□□□□□ -0.91
NUP54-201ENST00000264883 RBMY1CP0DJD4 496 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 HILS1P60008 231 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 RBMY1FQ15415 496 aaKnown RBP9.39□□□□□ -0.91
NUP54-201ENST00000264883 NBPF19A0A087WUL8 3843 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 NCR3O14931 201 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
NUP54-201ENST00000264883 KNCNA6PVL3 124 aa9.38□□□□□ -0.91
NUP54-201ENST00000264883 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
NUP54-201ENST00000264883 J3QLI3 93 aa9.38□□□□□ -0.91
NUP54-201ENST00000264883 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
NUP54-201ENST00000264883 GCN1Q92616 2671 aaKnown RBP9.38□□□□□ -0.91
NUP54-201ENST00000264883 TRAV23DV6A0A075B6W5 121 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 Q6ZSN1 163 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 H0YGX0 51 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 HTN1P15515 57 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 SMIM11BQ8TCY0 68 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 SERP1Q9Y6X1 66 aa9.37□□□□□ -0.91
NUP54-201ENST00000264883 CR1P17927 2039 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 AVPP01185 164 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 XCL1P47992 114 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 WFDC9Q8NEX5 89 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
NUP54-201ENST00000264883 LECT2O14960 151 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 CCKP06307 115 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 UNC79Q9P2D8 2635 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 CSPG4Q6UVK1 2322 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 UBE2E2Q96LR5 201 aa9.35□□□□□ -0.91
NUP54-201ENST00000264883 PDZD2O15018 2839 aa9.34□□□□□ -0.91
NUP54-201ENST00000264883 ATP5EP2Q5VTU8 51 aa9.34□□□□□ -0.91
NUP54-201ENST00000264883 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
NUP54-201ENST00000264883 ITPR2Q14571 2701 aa9.34□□□□□ -0.91
NUP54-201ENST00000264883 MAPK1IP1LQ8NDC0 245 aa9.34□□□□□ -0.91
NUP54-201ENST00000264883 ITPR3Q14573 2671 aa9.33□□□□□ -0.92
NUP54-201ENST00000264883 SLPIP03973 132 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 IGHV4-31P0DP07 118 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 FAM19A1Q7Z5A9 133 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
NUP54-201ENST00000264883 F8WDY8 70 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 ENHOQ6UWT2 76 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 MIR7-3HGQ8N6C7 128 aa9.32□□□□□ -0.92
NUP54-201ENST00000264883 ZFHX3Q15911 3703 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 IGHV4-59P01825 116 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
NUP54-201ENST00000264883 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
NUP54-201ENST00000264883 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
NUP54-201ENST00000264883 TEX15Q9BXT5 2789 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 H7BZZ5 65 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 DEFB131AP59861 70 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 Q96MF0 132 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 CCDC168Q8NDH2 2452 aa9.31□□□□□ -0.92
NUP54-201ENST00000264883 DEFB112Q30KQ8 113 aa9.3□□□□□ -0.92
NUP54-201ENST00000264883 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
NUP54-201ENST00000264883 FSHBP01225 129 aa9.3□□□□□ -0.92
NUP54-201ENST00000264883 C11orf72Q8NBR9 251 aa9.3□□□□□ -0.92
NUP54-201ENST00000264883 PRM2P04554 102 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms