RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 IGLV1-51P01701 117 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 PDE6GP18545 87 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 OXLD1Q5BKU9 147 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
CDH3-201ENST00000264012 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 UBE2D1P51668 147 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 TIMM17BO60830 172 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 NDUFB1O75438 58 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 LELP1Q5T871 98 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 PRRC2CQ9Y520 2896 aaKnown RBP10.17□□□□□ -0.78
CDH3-201ENST00000264012 COL4A2P08572 1712 aa10.17□□□□□ -0.78
CDH3-201ENST00000264012 TEX49A0A1B0GTD5 131 aa10.16□□□□□ -0.78
CDH3-201ENST00000264012 HIGD2AQ9BW72 106 aa10.16□□□□□ -0.78
CDH3-201ENST00000264012 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
CDH3-201ENST00000264012 ADAMTS20P59510 1910 aa10.16□□□□□ -0.78
CDH3-201ENST00000264012 IGHV4-30-4P0DP06 118 aa10.16□□□□□ -0.78
CDH3-201ENST00000264012 LINC00526Q96FQ7 95 aa10.15□□□□□ -0.78
CDH3-201ENST00000264012 CLUHP3Q96NS8 147 aa10.15□□□□□ -0.78
CDH3-201ENST00000264012 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.79
CDH3-201ENST00000264012 ACANP16112 2415 aa10.14□□□□□ -0.79
CDH3-201ENST00000264012 SLPIP03973 132 aa10.14□□□□□ -0.79
CDH3-201ENST00000264012 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
CDH3-201ENST00000264012 UQCRQO14949 82 aa10.13□□□□□ -0.79
CDH3-201ENST00000264012 C6orf99Q4VX62 202 aa10.13□□□□□ -0.79
CDH3-201ENST00000264012 C5orf47Q569G3 176 aa10.12□□□□□ -0.79
CDH3-201ENST00000264012 B9D2Q9BPU9 175 aa10.12□□□□□ -0.79
CDH3-201ENST00000264012 PRB2P02812 416 aaPredicted RBP10.12□□□□□ -0.79
CDH3-201ENST00000264012 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
CDH3-201ENST00000264012 LINC00242Q5T6M2 205 aa10.11□□□□□ -0.79
CDH3-201ENST00000264012 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
CDH3-201ENST00000264012 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
CDH3-201ENST00000264012 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
CDH3-201ENST00000264012 FAM19A5Q7Z5A7 132 aaPredicted RBP10.1□□□□□ -0.79
CDH3-201ENST00000264012 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
CDH3-201ENST00000264012 MP68P56378 58 aa10.09□□□□□ -0.79
CDH3-201ENST00000264012 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
CDH3-201ENST00000264012 A0A087WZ39 114 aa10.08□□□□□ -0.8
CDH3-201ENST00000264012 A0A0J9YWU9 116 aa10.08□□□□□ -0.8
CDH3-201ENST00000264012 CHCHD7Q9BUK0 85 aa10.08□□□□□ -0.8
CDH3-201ENST00000264012 A0A096LNJ9 63 aa10.08□□□□□ -0.8
CDH3-201ENST00000264012 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
CDH3-201ENST00000264012 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
CDH3-201ENST00000264012 XGP55808 180 aa10.07□□□□□ -0.8
CDH3-201ENST00000264012 TRAV23DV6A0A075B6W5 121 aa10.07□□□□□ -0.8
CDH3-201ENST00000264012 IGLV2-18A0A075B6J9 118 aa10.07□□□□□ -0.8
CDH3-201ENST00000264012 Q8IZM0 81 aa10.07□□□□□ -0.8
CDH3-201ENST00000264012 BPY2O14599 106 aa10.06□□□□□ -0.8
CDH3-201ENST00000264012 A0A096LNI7 61 aa10.06□□□□□ -0.8
CDH3-201ENST00000264012 TET2Q6N021 2002 aaPredicted RBP10.06□□□□□ -0.8
CDH3-201ENST00000264012 LST1O00453 97 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 LINC00694P0DN24 101 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 IGKV2-28A0A075B6P5 120 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 NDUFC2O95298 119 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 IGKV2D-28P01615 120 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 RETNQ9HD89 108 aa10.05□□□□□ -0.8
CDH3-201ENST00000264012 FHL2Q14192 279 aa10.04□□□□□ -0.8
CDH3-201ENST00000264012 Q6Q795 121 aa10.04□□□□□ -0.8
CDH3-201ENST00000264012 H0Y9J4 135 aa10.04□□□□□ -0.8
CDH3-201ENST00000264012 SMIM11BQ8TCY0 68 aa10.04□□□□□ -0.8
CDH3-201ENST00000264012 ATP5EP2Q5VTU8 51 aa10.04□□□□□ -0.8
CDH3-201ENST00000264012 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 Q6ZQY7 126 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 UPK3BQ9BT76 320 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 M0R378 163 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 IGLV4-60A0A075B6I1 120 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 COX17Q14061 63 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 Q6ZSN1 163 aa10.03□□□□□ -0.8
CDH3-201ENST00000264012 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
CDH3-201ENST00000264012 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
CDH3-201ENST00000264012 AMELXQ99217 191 aa10.02□□□□□ -0.81
CDH3-201ENST00000264012 COX6A2Q02221 97 aa10.01□□□□□ -0.81
CDH3-201ENST00000264012 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
CDH3-201ENST00000264012 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
CDH3-201ENST00000264012 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
CDH3-201ENST00000264012 FAM240AA0A1B0GVK7 77 aa10□□□□□ -0.81
CDH3-201ENST00000264012 Q8N2B8 174 aa10□□□□□ -0.81
CDH3-201ENST00000264012 M0R2N4 97 aa10□□□□□ -0.81
CDH3-201ENST00000264012 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
CDH3-201ENST00000264012 AGRNO00468 2067 aa9.99□□□□□ -0.81
CDH3-201ENST00000264012 CCKP06307 115 aa9.99□□□□□ -0.81
CDH3-201ENST00000264012 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
CDH3-201ENST00000264012 Q6ZTC4 211 aa9.99□□□□□ -0.81
CDH3-201ENST00000264012 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
CDH3-201ENST00000264012 LY6G6CO95867 125 aa9.98□□□□□ -0.81
CDH3-201ENST00000264012 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
CDH3-201ENST00000264012 ZNF73O43830 326 aaPredicted RBP9.97□□□□□ -0.81
CDH3-201ENST00000264012 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
CDH3-201ENST00000264012 ENHOQ6UWT2 76 aa9.97□□□□□ -0.81
CDH3-201ENST00000264012 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
CDH3-201ENST00000264012 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.81
CDH3-201ENST00000264012 C9orf116Q5BN46 136 aaPredicted RBP9.96□□□□□ -0.81
CDH3-201ENST00000264012 RPL37AP8A6NKH3 93 aa9.96□□□□□ -0.82
CDH3-201ENST00000264012 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
CDH3-201ENST00000264012 CCDC179H3BU77 68 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms