RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
SNRNP40-201ENST00000263694 F8VRH5 84 aa6.54□□□□□ -1.36
SNRNP40-201ENST00000263694 M0R2N4 97 aa6.54□□□□□ -1.36
SNRNP40-201ENST00000263694 XCL1P47992 114 aa6.54□□□□□ -1.36
SNRNP40-201ENST00000263694 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
SNRNP40-201ENST00000263694 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 CCL25O15444 150 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 DPM2O94777 84 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 IGKCP01834 107 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 CRPP02741 224 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 CHAC1Q9BUX1 264 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
SNRNP40-201ENST00000263694 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 hDV102S1A0JD36 115 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 C20orf202A1L168 122 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 SS18Q15532 418 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 STPG4Q8N801 248 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 LINC00476Q8WZB0 136 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 GEMIN7Q9H840 131 aaKnown RBP6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.36
SNRNP40-201ENST00000263694 NBDYA0A0U1RRE5 68 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 TNP2Q05952 138 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 TMEM170BQ5T4T1 132 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 FAM19A3Q7Z5A8 133 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 NFE4Q86UQ8 179 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 LINC00469Q8N7U9 141 aa6.52□□□□□ -1.37
SNRNP40-201ENST00000263694 IGHV3-64A0A075B6Q5 118 aa6.51□□□□□ -1.37
SNRNP40-201ENST00000263694 IGKV2D-24A0A075B6R9 120 aa6.51□□□□□ -1.37
SNRNP40-201ENST00000263694 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
SNRNP40-201ENST00000263694 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
SNRNP40-201ENST00000263694 MIAQ16674 131 aa6.51□□□□□ -1.37
SNRNP40-201ENST00000263694 IGHV3OR16-9A0A0B4J2B5 98 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 SPINK8P0C7L1 97 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 PLNP26678 52 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 HERVK_113P63121 156 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
SNRNP40-201ENST00000263694 TRAV8-3A0A0A6YYJ7 113 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 FOXI1Q12951 378 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 ANKRD39Q53RE8 183 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 C1orf43Q9BWL3 253 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
SNRNP40-201ENST00000263694 IGLV5-45A0A087WSX0 123 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 TMEM223A0PJW6 202 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 SEC11AP67812 179 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 Q6ZR54 194 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
SNRNP40-201ENST00000263694 A0A087WZ39 114 aa6.47□□□□□ -1.37
SNRNP40-201ENST00000263694 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
SNRNP40-201ENST00000263694 TTC32Q5I0X7 151 aa6.47□□□□□ -1.37
SNRNP40-201ENST00000263694 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
SNRNP40-201ENST00000263694 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
SNRNP40-201ENST00000263694 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.37
SNRNP40-201ENST00000263694 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 H3BRM9 83 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 K7EP13 123 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 COX7A2LO14548 114 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 C12orf57Q99622 126 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 VAMP8Q9BV40 100 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
SNRNP40-201ENST00000263694 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 LECT2O14960 151 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 MALP21145 153 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 TSPEAR-AS2P59090 65 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 LINC00518Q8N0U6 118 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 TP73-AS1Q9UF72 201 aa6.45□□□□□ -1.38
SNRNP40-201ENST00000263694 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 RMI2Q96E14 147 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 HYDINQ4G0P3 5121 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 IGHV1-58A0A0C4DH39 117 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 IGLV5-39A0A0G2JS06 123 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 E9PLD3 99 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 NMUP48645 174 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 WFDC2Q14508 124 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 Q6ZRN7 208 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 PCP2Q8IVA1 136 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
SNRNP40-201ENST00000263694 LCE6AA0A183 80 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 LEPROTO15243 131 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 PSCAO43653 123 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 HERVK_113P61574 105 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 S100A12P80511 92 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 TM2D2Q9BX73 214 aa6.43□□□□□ -1.38
SNRNP40-201ENST00000263694 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms