RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SMIM9A6NGZ8 99 aa9.54□□□□□ -0.88
TTC39A-202ENST00000262676 CFAP126Q5VTH2 177 aa9.54□□□□□ -0.88
TTC39A-202ENST00000262676 DHRS4-AS1Q9P1J3 65 aa9.54□□□□□ -0.88
TTC39A-202ENST00000262676 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
TTC39A-202ENST00000262676 BEAN1Q3B7T3 259 aa9.53□□□□□ -0.88
TTC39A-202ENST00000262676 C18orf65Q6ZTR6 163 aa9.53□□□□□ -0.88
TTC39A-202ENST00000262676 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
TTC39A-202ENST00000262676 SPINK1P00995 79 aa9.52□□□□□ -0.88
TTC39A-202ENST00000262676 M0R378 163 aa9.52□□□□□ -0.89
TTC39A-202ENST00000262676 ZFYVE26Q68DK2 2539 aa9.52□□□□□ -0.89
TTC39A-202ENST00000262676 IGLV1-47P01700 117 aa9.52□□□□□ -0.89
TTC39A-202ENST00000262676 NCOA6Q14686 2063 aaPredicted RBP9.51□□□□□ -0.89
TTC39A-202ENST00000262676 OBSL1O75147 1896 aa9.51□□□□□ -0.89
TTC39A-202ENST00000262676 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
TTC39A-202ENST00000262676 LST1O00453 97 aa9.51□□□□□ -0.89
TTC39A-202ENST00000262676 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
TTC39A-202ENST00000262676 PLXNB3Q9ULL4 1909 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 PCOTHQ58A44 107 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 M0QY20 66 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 Q6JHZ5 121 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 MED12LQ86YW9 2145 aa9.5□□□□□ -0.89
TTC39A-202ENST00000262676 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
TTC39A-202ENST00000262676 PRYO14603 147 aa9.49□□□□□ -0.89
TTC39A-202ENST00000262676 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
TTC39A-202ENST00000262676 C11orf71Q6IPW1 123 aa9.49□□□□□ -0.89
TTC39A-202ENST00000262676 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
TTC39A-202ENST00000262676 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
TTC39A-202ENST00000262676 Q6ZS46 218 aa9.48□□□□□ -0.89
TTC39A-202ENST00000262676 TRAV7A0A075B6U4 112 aa9.48□□□□□ -0.89
TTC39A-202ENST00000262676 A0A087WVE0 104 aa9.48□□□□□ -0.89
TTC39A-202ENST00000262676 C10orf25Q5T742 122 aa9.47□□□□□ -0.89
TTC39A-202ENST00000262676 CRIP1P50238 77 aa9.47□□□□□ -0.89
TTC39A-202ENST00000262676 WDR87Q6ZQQ6 2873 aa9.46□□□□□ -0.89
TTC39A-202ENST00000262676 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.89
TTC39A-202ENST00000262676 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
TTC39A-202ENST00000262676 C11orf1Q9H5F2 150 aa9.46□□□□□ -0.89
TTC39A-202ENST00000262676 ZNF73O43830 326 aaPredicted RBP9.46□□□□□ -0.9
TTC39A-202ENST00000262676 C2orf91Q6ZV80 131 aa9.46□□□□□ -0.9
TTC39A-202ENST00000262676 CRYGAP11844 174 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 U3KQK5 164 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 IGLV4-69A0A075B6H9 119 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 K7EQG2 157 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 TSHBP01222 138 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 LOC107984640A0A0U1RRK4 108 aa9.45□□□□□ -0.9
TTC39A-202ENST00000262676 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 AVPP01185 164 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
TTC39A-202ENST00000262676 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 ZNF702PQ9H963 129 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 ODF3BA8MYP8 253 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
TTC39A-202ENST00000262676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
TTC39A-202ENST00000262676 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
TTC39A-202ENST00000262676 Q6ZSR3 168 aa9.43□□□□□ -0.9
TTC39A-202ENST00000262676 ARHGAP32A7KAX9 2087 aa9.42□□□□□ -0.9
TTC39A-202ENST00000262676 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
TTC39A-202ENST00000262676 PRM2P04554 102 aa9.42□□□□□ -0.9
TTC39A-202ENST00000262676 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
TTC39A-202ENST00000262676 LRRK2Q5S007 2527 aa9.41□□□□□ -0.9
TTC39A-202ENST00000262676 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
TTC39A-202ENST00000262676 ALPK3Q96L96 1907 aa9.4□□□□□ -0.9
TTC39A-202ENST00000262676 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.91
TTC39A-202ENST00000262676 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
TTC39A-202ENST00000262676 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
TTC39A-202ENST00000262676 NRACQ8N912 160 aa9.39□□□□□ -0.91
TTC39A-202ENST00000262676 CENPFP49454 3210 aa9.39□□□□□ -0.91
TTC39A-202ENST00000262676 H0Y9P7 68 aa9.39□□□□□ -0.91
TTC39A-202ENST00000262676 C1orf137Q5JT78 98 aa9.39□□□□□ -0.91
TTC39A-202ENST00000262676 A0A087WYN8 130 aa9.38□□□□□ -0.91
TTC39A-202ENST00000262676 BRI3O95415 125 aa9.38□□□□□ -0.91
TTC39A-202ENST00000262676 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
TTC39A-202ENST00000262676 TANC2Q9HCD6 1990 aa9.38□□□□□ -0.91
TTC39A-202ENST00000262676 CRIP2P52943 208 aaPredicted RBP9.38□□□□□ -0.91
TTC39A-202ENST00000262676 COX17Q14061 63 aa9.38□□□□□ -0.91
TTC39A-202ENST00000262676 P0C879 139 aa9.37□□□□□ -0.91
TTC39A-202ENST00000262676 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 Q8N814 137 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 PCNX3Q9H6A9 2034 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
TTC39A-202ENST00000262676 Q9UF83 564 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 RPL28P46779 137 aaKnown RBP9.36□□□□□ -0.91
TTC39A-202ENST00000262676 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
TTC39A-202ENST00000262676 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
TTC39A-202ENST00000262676 LELP1Q5T871 98 aa9.36□□□□□ -0.91
TTC39A-202ENST00000262676 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
TTC39A-202ENST00000262676 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
TTC39A-202ENST00000262676 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
TTC39A-202ENST00000262676 Q8N3U1 123 aa9.35□□□□□ -0.91
TTC39A-202ENST00000262676 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
TTC39A-202ENST00000262676 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
TTC39A-202ENST00000262676 PRR9Q5T870 116 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms