RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TRANK1O15050 2925 aa9.6□□□□□ -0.87
TMEM260-201ENST00000261556 IGHV4OR15-8A0A075B7B6 117 aa9.6□□□□□ -0.87
TMEM260-201ENST00000261556 A0A087WW49 117 aa9.6□□□□□ -0.87
TMEM260-201ENST00000261556 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
TMEM260-201ENST00000261556 F8P00451 2351 aa9.59□□□□□ -0.87
TMEM260-201ENST00000261556 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
TMEM260-201ENST00000261556 H0YGX0 51 aa9.59□□□□□ -0.87
TMEM260-201ENST00000261556 RPL28P46779 137 aaKnown RBP9.59□□□□□ -0.87
TMEM260-201ENST00000261556 LENEPQ9Y5L5 61 aa9.59□□□□□ -0.87
TMEM260-201ENST00000261556 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
TMEM260-201ENST00000261556 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
TMEM260-201ENST00000261556 ANGP03950 147 aaKnown RBP9.58□□□□□ -0.88
TMEM260-201ENST00000261556 PRR9Q5T870 116 aa9.58□□□□□ -0.88
TMEM260-201ENST00000261556 USP24Q9UPU5 2620 aa9.57□□□□□ -0.88
TMEM260-201ENST00000261556 COX7B2Q8TF08 81 aa9.57□□□□□ -0.88
TMEM260-201ENST00000261556 CCKP06307 115 aa9.57□□□□□ -0.88
TMEM260-201ENST00000261556 EYSQ5T1H1 3165 aa9.57□□□□□ -0.88
TMEM260-201ENST00000261556 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
TMEM260-201ENST00000261556 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
TMEM260-201ENST00000261556 MIFP14174 115 aa9.56□□□□□ -0.88
TMEM260-201ENST00000261556 Q8N2B8 174 aa9.56□□□□□ -0.88
TMEM260-201ENST00000261556 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
TMEM260-201ENST00000261556 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
TMEM260-201ENST00000261556 UNQ9165/PRO28630Q6UXU0 137 aa9.56□□□□□ -0.88
TMEM260-201ENST00000261556 LRP4O75096 1905 aa9.55□□□□□ -0.88
TMEM260-201ENST00000261556 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
TMEM260-201ENST00000261556 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
TMEM260-201ENST00000261556 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
TMEM260-201ENST00000261556 TMEM89A2RUT3 159 aa9.55□□□□□ -0.88
TMEM260-201ENST00000261556 C10orf142B7Z368 130 aa9.54□□□□□ -0.88
TMEM260-201ENST00000261556 JMJD7-PLA2G4BH0Y9G9 81 aa9.54□□□□□ -0.88
TMEM260-201ENST00000261556 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
TMEM260-201ENST00000261556 A0A087WYN8 130 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 LINC01546A6NGU7 62 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 ZNF843Q8N446 348 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 CLPSL1A2RUU4 121 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 GPHB5Q86YW7 130 aa9.53□□□□□ -0.88
TMEM260-201ENST00000261556 A6NDX4 124 aa9.52□□□□□ -0.88
TMEM260-201ENST00000261556 MAST4O15021 2626 aa9.52□□□□□ -0.89
TMEM260-201ENST00000261556 ATP5EP2Q5VTU8 51 aa9.52□□□□□ -0.89
TMEM260-201ENST00000261556 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
TMEM260-201ENST00000261556 K7EMT4 169 aa9.51□□□□□ -0.89
TMEM260-201ENST00000261556 ATRQ13535 2644 aa9.51□□□□□ -0.89
TMEM260-201ENST00000261556 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
TMEM260-201ENST00000261556 TRIOO75962 3097 aa9.51□□□□□ -0.89
TMEM260-201ENST00000261556 A0A0J9YX75 114 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 NDUFC1O43677 76 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 HECTD1Q9ULT8 2610 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 DEFB4AO15263 64 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
TMEM260-201ENST00000261556 DEFB135Q30KP9 77 aa9.49□□□□□ -0.89
TMEM260-201ENST00000261556 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
TMEM260-201ENST00000261556 ODF3BA8MYP8 253 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 SPART-AS1P0CW21 52 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
TMEM260-201ENST00000261556 USP34Q70CQ2 3546 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 GYPEP15421 78 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 IGKV2D-24A0A075B6R9 120 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 IGHV4-31P0DP07 118 aa9.48□□□□□ -0.89
TMEM260-201ENST00000261556 ATP5EP56381 51 aaPredicted RBP9.47□□□□□ -0.89
TMEM260-201ENST00000261556 ESRGQ1W209 222 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 AMELXQ99217 191 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 INAFM1C9JVW0 142 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 NDUFA1O15239 70 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 Q8N3U1 123 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 MGAM2Q2M2H8 2515 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 CHKB-CPT1BH3BT56 60 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 PROK1P58294 105 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
TMEM260-201ENST00000261556 MUC22E2RYF6 1773 aaPredicted RBP9.46□□□□□ -0.89
TMEM260-201ENST00000261556 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
TMEM260-201ENST00000261556 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
TMEM260-201ENST00000261556 TMEM256-PLSCR3K7ERE1 68 aa9.46□□□□□ -0.9
TMEM260-201ENST00000261556 M0QY20 66 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-201ENST00000261556 PSMG3-AS1Q96PY0 264 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 NREPQ16612 68 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 COL6A3P12111 3177 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
TMEM260-201ENST00000261556 C11orf71Q6IPW1 123 aa9.44□□□□□ -0.9
TMEM260-201ENST00000261556 H7BZZ5 65 aa9.44□□□□□ -0.9
TMEM260-201ENST00000261556 Q6ZTI0 123 aa9.44□□□□□ -0.9
TMEM260-201ENST00000261556 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
TMEM260-201ENST00000261556 REV3LO60673 3130 aa9.44□□□□□ -0.9
TMEM260-201ENST00000261556 ANKRD17O75179 2603 aaKnown RBP9.43□□□□□ -0.9
TMEM260-201ENST00000261556 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
TMEM260-201ENST00000261556 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
TMEM260-201ENST00000261556 SPTBN5Q9NRC6 3674 aaKnown RBP9.43□□□□□ -0.9
TMEM260-201ENST00000261556 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
TMEM260-201ENST00000261556 C10orf99Q6UWK7 81 aa9.43□□□□□ -0.9
TMEM260-201ENST00000261556 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
TMEM260-201ENST00000261556 CD164Q04900 197 aa9.42□□□□□ -0.9
TMEM260-201ENST00000261556 Q6YL49 198 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms