RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CSDC2Q9Y534 153 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 HTN1P15515 57 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 C11orf72Q8NBR9 251 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 RS1O15537 224 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 MALP21145 153 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 RPL28P46779 137 aaKnown RBP7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 C5orf47Q569G3 176 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 HIST2H2BDQ6DRA6 164 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 DGAT2L7PQ6IED9 249 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 ZNF625Q96I27 306 aaPredicted RBP7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 EPG5Q9HCE0 2579 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 CELSR1Q9NYQ6 3014 aa7.71□□□□□ -1.17
CHRNA1-201ENST00000261007 TRAV13-2A0A0B4J235 113 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 COX6A2Q02221 97 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 CRYBG3Q68DQ2 2970 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 Q6ZSN1 163 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.18
CHRNA1-201ENST00000261007 IGHV3OR16-12A0A075B7B8 117 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 ABCA12Q86UK0 2595 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 IGLV1-51P01701 117 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 IL17DQ8TAD2 202 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 FAM218AQ96MZ4 157 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 Q9UF83 564 aa7.7□□□□□ -1.18
CHRNA1-201ENST00000261007 CELSR2Q9HCU4 2923 aa7.69□□□□□ -1.18
CHRNA1-201ENST00000261007 PRIMA1Q86XR5 153 aa7.69□□□□□ -1.18
CHRNA1-201ENST00000261007 VPS13CQ709C8 3753 aa7.69□□□□□ -1.18
CHRNA1-201ENST00000261007 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
CHRNA1-201ENST00000261007 Q6JHZ5 121 aa7.68□□□□□ -1.18
CHRNA1-201ENST00000261007 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
CHRNA1-201ENST00000261007 OBSCN-AS1Q96MR7 158 aa7.68□□□□□ -1.18
CHRNA1-201ENST00000261007 IGHV3-38A0A0C4DH36 116 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 LOC107984640A0A0U1RRK4 108 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 SMIM9A6NGZ8 99 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 OR13C6PQ8NH95 151 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 SORL1Q92673 2214 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 APCP25054 2843 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 ZFHX3Q15911 3703 aa7.67□□□□□ -1.18
CHRNA1-201ENST00000261007 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 F5H768 121 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 H0YGX0 51 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 DNAL4O96015 105 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 TMEM258P61165 79 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 KLK5Q9Y337 293 aaPredicted RBP7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 ITPR3Q14573 2671 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 CRPP02741 224 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
CHRNA1-201ENST00000261007 TEX15Q9BXT5 2789 aa7.65□□□□□ -1.18
CHRNA1-201ENST00000261007 ZANQ9Y493 2812 aa7.65□□□□□ -1.19
CHRNA1-201ENST00000261007 NACAE9PAV3 2078 aa7.65□□□□□ -1.19
CHRNA1-201ENST00000261007 TRGV1A0A0A0MS02 117 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 OXLD1Q5BKU9 147 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 Q9HAA7 133 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 hADV29S1A0JD25 119 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 LY6G6DO95868 133 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 RPL36AP83881 106 aaKnown RBP7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 RPL36ALQ969Q0 106 aaKnown RBP7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 C19orf73Q9NVV2 129 aa7.64□□□□□ -1.19
CHRNA1-201ENST00000261007 PRM2P04554 102 aa7.63□□□□□ -1.19
CHRNA1-201ENST00000261007 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
CHRNA1-201ENST00000261007 CDC42SE2Q9NRR3 84 aa7.63□□□□□ -1.19
CHRNA1-201ENST00000261007 K7EQD1 137 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 WIPF1O43516 503 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 CSMD2Q7Z408 3487 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 KMT2BQ9UMN6 2715 aaPredicted RBP7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 TRAV13-1A0A0B4J241 112 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
CHRNA1-201ENST00000261007 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
CHRNA1-201ENST00000261007 LINC00482Q8N8I6 264 aa7.61□□□□□ -1.19
CHRNA1-201ENST00000261007 SMIM11BQ8TCY0 68 aa7.61□□□□□ -1.19
CHRNA1-201ENST00000261007 CENPEQ02224 2701 aa7.61□□□□□ -1.19
CHRNA1-201ENST00000261007 MYO9AB2RTY4 2548 aa7.61□□□□□ -1.19
CHRNA1-201ENST00000261007 GIG44P09565 113 aaPredicted RBP7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 C14orf132Q9NPU4 83 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 LINC00846Q9NV44 126 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 MAP1AP78559 2803 aaPredicted RBP7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 A0A087WYN8 130 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 NTM-AS1Q6ZSK4 140 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 Q6ZTI0 123 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 COX7B2Q8TF08 81 aa7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 FLNAP21333 2647 aaKnown RBP7.6□□□□□ -1.19
CHRNA1-201ENST00000261007 SONP18583 2426 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms