RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 SPINK1P00995 79 aa10.43□□□□□ -0.74
ZC3H4-201ENST00000253048 CUL9Q8IWT3 2517 aa10.43□□□□□ -0.74
ZC3H4-201ENST00000253048 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
ZC3H4-201ENST00000253048 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
ZC3H4-201ENST00000253048 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
ZC3H4-201ENST00000253048 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
ZC3H4-201ENST00000253048 PRM2P04554 102 aa10.42□□□□□ -0.74
ZC3H4-201ENST00000253048 NDUFC1O43677 76 aa10.42□□□□□ -0.74
ZC3H4-201ENST00000253048 ESRGQ1W209 222 aa10.42□□□□□ -0.74
ZC3H4-201ENST00000253048 C11orf1Q9H5F2 150 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 TRBV30A0A0K0K1B3 111 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 TRBV27A0A0K0K1C4 114 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 COX17Q14061 63 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 RETNLBQ9BQ08 111 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 TTTY13Q9BZ97 58 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 LST1O00453 97 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 WWC2-AS2Q96NR7 200 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 LIMD2Q9BT23 127 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
ZC3H4-201ENST00000253048 CYSRT1A8MQ03 144 aa10.4□□□□□ -0.74
ZC3H4-201ENST00000253048 C16orf90A8MZG2 172 aa10.4□□□□□ -0.75
ZC3H4-201ENST00000253048 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.75
ZC3H4-201ENST00000253048 LINC00308Q8TCZ7 52 aa10.4□□□□□ -0.75
ZC3H4-201ENST00000253048 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 POM121L12Q8N7R1 296 aa10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 CSDC2Q9Y534 153 aaKnown RBP10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 WFDC2Q14508 124 aa10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
ZC3H4-201ENST00000253048 Q6Q795 121 aa10.38□□□□□ -0.75
ZC3H4-201ENST00000253048 EGFEM1PQ0D2K5 195 aa10.38□□□□□ -0.75
ZC3H4-201ENST00000253048 NDUFV3P56181 108 aaKnown RBP10.38□□□□□ -0.75
ZC3H4-201ENST00000253048 UQCRQO14949 82 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 DNAH12Q6ZR08 3092 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 P0C879 139 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 FXYD2P54710 66 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 KLLNB2CW77 178 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 KRTAP24-1Q3LI83 254 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 PYGO1Q9Y3Y4 419 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 SPG11Q96JI7 2443 aa10.37□□□□□ -0.75
ZC3H4-201ENST00000253048 C2orf48Q96LS8 159 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 Q8IZM0 81 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 FAM30AQ9NZY2 134 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 TNCP24821 2201 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 MED12LQ86YW9 2145 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 TSHBP01222 138 aa10.36□□□□□ -0.75
ZC3H4-201ENST00000253048 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
ZC3H4-201ENST00000253048 SNURFQ9Y675 71 aa10.35□□□□□ -0.75
ZC3H4-201ENST00000253048 Q6ZQY7 126 aa10.35□□□□□ -0.75
ZC3H4-201ENST00000253048 EDN2P20800 178 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 COX6A2Q02221 97 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 IGHV6-1A0A0B4J1U7 121 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 TIMM17BO60830 172 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
ZC3H4-201ENST00000253048 PCNTO95613 3336 aa10.33□□□□□ -0.76
ZC3H4-201ENST00000253048 F8WDY8 70 aa10.33□□□□□ -0.76
ZC3H4-201ENST00000253048 LYPD5Q6UWN5 251 aa10.33□□□□□ -0.76
ZC3H4-201ENST00000253048 ACACBO00763 2458 aa10.32□□□□□ -0.76
ZC3H4-201ENST00000253048 PRR9Q5T870 116 aa10.32□□□□□ -0.76
ZC3H4-201ENST00000253048 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 EIF4EBP1Q13541 118 aaPredicted RBP10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 FHL2Q14192 279 aa10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 UNQ6190/PRO20217Q6UXQ8 127 aa10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 A0A1W2PPR1 153 aa10.31□□□□□ -0.76
ZC3H4-201ENST00000253048 CEP192Q8TEP8 1941 aa10.3□□□□□ -0.76
ZC3H4-201ENST00000253048 ANKHD1Q8IWZ3 2542 aaKnown RBP10.3□□□□□ -0.76
ZC3H4-201ENST00000253048 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
ZC3H4-201ENST00000253048 PTH2Q96A98 100 aa10.3□□□□□ -0.76
ZC3H4-201ENST00000253048 C1orf195Q5TG92 126 aa10.29□□□□□ -0.76
ZC3H4-201ENST00000253048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.29□□□□□ -0.76
ZC3H4-201ENST00000253048 A8MZ25 164 aa10.28□□□□□ -0.76
ZC3H4-201ENST00000253048 Q9BRP9 147 aa10.28□□□□□ -0.76
ZC3H4-201ENST00000253048 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.76
ZC3H4-201ENST00000253048 Q6JHZ5 121 aa10.27□□□□□ -0.76
ZC3H4-201ENST00000253048 NUP210LQ5VU65 1888 aa10.27□□□□□ -0.76
ZC3H4-201ENST00000253048 CRIP1P50238 77 aa10.27□□□□□ -0.77
ZC3H4-201ENST00000253048 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
ZC3H4-201ENST00000253048 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
ZC3H4-201ENST00000253048 ZNF580Q9UK33 172 aa10.26□□□□□ -0.77
ZC3H4-201ENST00000253048 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
ZC3H4-201ENST00000253048 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
ZC3H4-201ENST00000253048 RNASE8Q8TDE3 154 aaKnown RBP10.23□□□□□ -0.77
ZC3H4-201ENST00000253048 PRLHP81277 87 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 MT-ATP8P03928 68 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 SMIM11BQ8TCY0 68 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 YPEL4Q96NS1 127 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 HIVEP3Q5T1R4 2406 aa10.22□□□□□ -0.77
ZC3H4-201ENST00000253048 PLXNB1O43157 2135 aa10.21□□□□□ -0.77
ZC3H4-201ENST00000253048 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.78
ZC3H4-201ENST00000253048 SONP18583 2426 aaKnown RBP10.21□□□□□ -0.78
ZC3H4-201ENST00000253048 C11orf21Q9P2W6 132 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms