RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 NDUFA4O00483 81 aa13.27□□□□□ -0.29
PTPN12-201ENST00000248594 SNURFQ9Y675 71 aa13.27□□□□□ -0.29
PTPN12-201ENST00000248594 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
PTPN12-201ENST00000248594 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
PTPN12-201ENST00000248594 IGHV3-53P01767 116 aa13.26□□□□□ -0.29
PTPN12-201ENST00000248594 MINOS1-NBL1R4GNA1 71 aa13.26□□□□□ -0.29
PTPN12-201ENST00000248594 C9orf85Q96MD7 179 aa13.25□□□□□ -0.29
PTPN12-201ENST00000248594 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
PTPN12-201ENST00000248594 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
PTPN12-201ENST00000248594 PAX4O43316 350 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 RPL28P46779 137 aaKnown RBP13.24□□□□□ -0.29
PTPN12-201ENST00000248594 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 CHD6Q8TD26 2715 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 BLCAPP62952 87 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 C5orf56Q8N8D9 126 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 BPESC1Q9GZL8 116 aa13.24□□□□□ -0.29
PTPN12-201ENST00000248594 SND1-IT1Q9HBX3 110 aa13.23□□□□□ -0.29
PTPN12-201ENST00000248594 CFAP46Q8IYW2 2715 aa13.23□□□□□ -0.29
PTPN12-201ENST00000248594 UPK3BQ9BT76 320 aa13.23□□□□□ -0.29
PTPN12-201ENST00000248594 FAM236DA0A1B0GTK5 79 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 FAM236CP0DP71 79 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 SNRPD3P62318 126 aaKnown RBP13.22□□□□□ -0.29
PTPN12-201ENST00000248594 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 BRK1Q8WUW1 75 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 CHCHD7Q9BUK0 85 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 ACANP16112 2415 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 ZNF415Q09FC8 603 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 C19orf54Q5BKX5 351 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 SMIM11BQ8TCY0 68 aa13.22□□□□□ -0.29
PTPN12-201ENST00000248594 CFHR3Q02985 330 aa13.21□□□□□ -0.3
PTPN12-201ENST00000248594 PKD1L2Q7Z442 2459 aa13.21□□□□□ -0.3
PTPN12-201ENST00000248594 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
PTPN12-201ENST00000248594 KHDC1LQ5JSQ8 128 aa13.2□□□□□ -0.3
PTPN12-201ENST00000248594 Q6JHZ5 121 aa13.2□□□□□ -0.3
PTPN12-201ENST00000248594 PRORYQ9H606 182 aa13.2□□□□□ -0.3
PTPN12-201ENST00000248594 MXRA5Q9NR99 2828 aa13.2□□□□□ -0.3
PTPN12-201ENST00000248594 MAPK1IP1LQ8NDC0 245 aa13.19□□□□□ -0.3
PTPN12-201ENST00000248594 LINC00242Q5T6M2 205 aa13.19□□□□□ -0.3
PTPN12-201ENST00000248594 TIMM17BO60830 172 aa13.18□□□□□ -0.3
PTPN12-201ENST00000248594 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
PTPN12-201ENST00000248594 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
PTPN12-201ENST00000248594 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
PTPN12-201ENST00000248594 V9GYY9 64 aa13.17□□□□□ -0.3
PTPN12-201ENST00000248594 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
PTPN12-201ENST00000248594 PRO0628Q9UI54 55 aa13.17□□□□□ -0.3
PTPN12-201ENST00000248594 TRAV13-2A0A0B4J235 113 aa13.16□□□□□ -0.3
PTPN12-201ENST00000248594 HAMPP81172 84 aa13.16□□□□□ -0.3
PTPN12-201ENST00000248594 APRG1Q8IVJ8 170 aa13.16□□□□□ -0.3
PTPN12-201ENST00000248594 SMIM1B2RUZ4 78 aa13.16□□□□□ -0.3
PTPN12-201ENST00000248594 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
PTPN12-201ENST00000248594 XCL1P47992 114 aa13.15□□□□□ -0.3
PTPN12-201ENST00000248594 XCL2Q9UBD3 114 aa13.15□□□□□ -0.3
PTPN12-201ENST00000248594 TEX15Q9BXT5 2789 aa13.15□□□□□ -0.3
PTPN12-201ENST00000248594 H3BUX3 64 aa13.15□□□□□ -0.3
PTPN12-201ENST00000248594 FAM222AQ5U5X8 452 aa13.15□□□□□ -0.3
PTPN12-201ENST00000248594 MPLKIPQ8TAP9 179 aa13.14□□□□□ -0.31
PTPN12-201ENST00000248594 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
PTPN12-201ENST00000248594 RMI2Q96E14 147 aa13.13□□□□□ -0.31
PTPN12-201ENST00000248594 LINC00474Q9P2X8 69 aa13.13□□□□□ -0.31
PTPN12-201ENST00000248594 DEFB131AP59861 70 aa13.12□□□□□ -0.31
PTPN12-201ENST00000248594 PSMB8P28062 276 aa13.12□□□□□ -0.31
PTPN12-201ENST00000248594 HIVEP2P31629 2446 aa13.11□□□□□ -0.31
PTPN12-201ENST00000248594 ADORA2A-AS1P86434 159 aa13.11□□□□□ -0.31
PTPN12-201ENST00000248594 Q6ZTI0 123 aa13.11□□□□□ -0.31
PTPN12-201ENST00000248594 IGHV4-38-2P0DP08 117 aa13.1□□□□□ -0.31
PTPN12-201ENST00000248594 IGKV2-28A0A075B6P5 120 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 IGKV2D-28P01615 120 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
PTPN12-201ENST00000248594 SCXQ7RTU7 201 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 ORMDL1Q9P0S3 153 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 UBE2E2Q96LR5 201 aa13.09□□□□□ -0.31
PTPN12-201ENST00000248594 NDUFC2O95298 119 aa13.08□□□□□ -0.32
PTPN12-201ENST00000248594 UBE2L6O14933 153 aa13.08□□□□□ -0.32
PTPN12-201ENST00000248594 TRGV1A0A0A0MS02 117 aa13.07□□□□□ -0.32
PTPN12-201ENST00000248594 F8WEM9 126 aa13.07□□□□□ -0.32
PTPN12-201ENST00000248594 Q96MF0 132 aa13.07□□□□□ -0.32
PTPN12-201ENST00000248594 K7ENP7 123 aa13.07□□□□□ -0.32
PTPN12-201ENST00000248594 UBL5Q9BZL1 73 aa13.07□□□□□ -0.32
PTPN12-201ENST00000248594 CCL18P55774 89 aa13.06□□□□□ -0.32
PTPN12-201ENST00000248594 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
PTPN12-201ENST00000248594 ZNF462Q96JM2 2506 aa13.05□□□□□ -0.32
PTPN12-201ENST00000248594 IGLV5-39A0A0G2JS06 123 aa13.05□□□□□ -0.32
PTPN12-201ENST00000248594 C19orf84I3L1E1 186 aa13.04□□□□□ -0.32
PTPN12-201ENST00000248594 TMEM86BQ8N661 226 aa13.03□□□□□ -0.32
PTPN12-201ENST00000248594 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
PTPN12-201ENST00000248594 SS18Q15532 418 aa13.03□□□□□ -0.32
PTPN12-201ENST00000248594 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
PTPN12-201ENST00000248594 H0YGX0 51 aa13.02□□□□□ -0.32
PTPN12-201ENST00000248594 COX7B2Q8TF08 81 aa13.02□□□□□ -0.32
PTPN12-201ENST00000248594 OVOL2Q9BRP0 275 aa13.02□□□□□ -0.32
PTPN12-201ENST00000248594 CCKP06307 115 aa13.02□□□□□ -0.33
PTPN12-201ENST00000248594 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
PTPN12-201ENST00000248594 LAMTOR3Q9UHA4 124 aa13.02□□□□□ -0.33
PTPN12-201ENST00000248594 SERP1Q9Y6X1 66 aa13.01□□□□□ -0.33
PTPN12-201ENST00000248594 TRAV10A0A0B4J240 114 aa13.01□□□□□ -0.33
PTPN12-201ENST00000248594 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
PTPN12-201ENST00000248594 IL17DQ8TAD2 202 aa13.01□□□□□ -0.33
PTPN12-201ENST00000248594 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms