RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 ABCA13Q86UQ4 5058 aa12.55□□□□□ -0.4
CENPA-201ENST00000233505 A0A096LNJ9 63 aa12.54□□□□□ -0.4
CENPA-201ENST00000233505 IGHV3OR16-9A0A0B4J2B5 98 aa12.54□□□□□ -0.4
CENPA-201ENST00000233505 hDV102S1A0JD36 115 aa12.54□□□□□ -0.4
CENPA-201ENST00000233505 UBE2D1P51668 147 aa12.54□□□□□ -0.4
CENPA-201ENST00000233505 CDK2AP2O75956 126 aa12.53□□□□□ -0.4
CENPA-201ENST00000233505 KRTAP10-1P60331 282 aa12.53□□□□□ -0.4
CENPA-201ENST00000233505 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
CENPA-201ENST00000233505 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.41
CENPA-201ENST00000233505 ATP6V1G1O75348 118 aa12.51□□□□□ -0.41
CENPA-201ENST00000233505 MALP21145 153 aa12.51□□□□□ -0.41
CENPA-201ENST00000233505 SEC11AP67812 179 aa12.5□□□□□ -0.41
CENPA-201ENST00000233505 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
CENPA-201ENST00000233505 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
CENPA-201ENST00000233505 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
CENPA-201ENST00000233505 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.49□□□□□ -0.41
CENPA-201ENST00000233505 APOMO95445 188 aa12.49□□□□□ -0.41
CENPA-201ENST00000233505 HIGD2BQ4VC39 106 aa12.49□□□□□ -0.41
CENPA-201ENST00000233505 ZC2HC1BQ5TFG8 222 aa12.49□□□□□ -0.41
CENPA-201ENST00000233505 C5orf38Q86SI9 138 aa12.49□□□□□ -0.41
CENPA-201ENST00000233505 C9orf163Q8N9P6 203 aa12.49□□□□□ -0.41
CENPA-201ENST00000233505 A0A087WZ39 114 aa12.48□□□□□ -0.41
CENPA-201ENST00000233505 LINC01561Q8N1V8 128 aa12.48□□□□□ -0.41
CENPA-201ENST00000233505 ATP5LO75964 103 aa12.47□□□□□ -0.41
CENPA-201ENST00000233505 SLPIP03973 132 aa12.47□□□□□ -0.41
CENPA-201ENST00000233505 PMVKQ15126 192 aa12.47□□□□□ -0.41
CENPA-201ENST00000233505 PMCHL1Q16048 86 aa12.47□□□□□ -0.41
CENPA-201ENST00000233505 OR10D4PQ8NGN7 298 aa12.47□□□□□ -0.41
CENPA-201ENST00000233505 HSBP1O75506 76 aa12.46□□□□□ -0.41
CENPA-201ENST00000233505 HERVK_113P63121 156 aa12.46□□□□□ -0.41
CENPA-201ENST00000233505 COX6A2Q02221 97 aa12.46□□□□□ -0.41
CENPA-201ENST00000233505 LCE2DQ5TA82 110 aaPredicted RBP12.46□□□□□ -0.41
CENPA-201ENST00000233505 Q6ZSA8 131 aa12.46□□□□□ -0.41
CENPA-201ENST00000233505 CST9LQ9H4G1 147 aa12.46□□□□□ -0.41
CENPA-201ENST00000233505 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
CENPA-201ENST00000233505 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
CENPA-201ENST00000233505 KRTAP4-5Q9BYR2 181 aa12.45□□□□□ -0.42
CENPA-201ENST00000233505 LINC00310P59036 64 aa12.44□□□□□ -0.42
CENPA-201ENST00000233505 C2orf48Q96LS8 159 aa12.44□□□□□ -0.42
CENPA-201ENST00000233505 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
CENPA-201ENST00000233505 F8WDY8 70 aa12.43□□□□□ -0.42
CENPA-201ENST00000233505 SERF1AO75920 110 aa12.43□□□□□ -0.42
CENPA-201ENST00000233505 LINC01620Q4KN68 170 aa12.43□□□□□ -0.42
CENPA-201ENST00000233505 GEMIN7Q9H840 131 aaKnown RBP12.43□□□□□ -0.42
CENPA-201ENST00000233505 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
CENPA-201ENST00000233505 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
CENPA-201ENST00000233505 SPAG11BQ08648 103 aa12.42□□□□□ -0.42
CENPA-201ENST00000233505 ORAOV1Q8WV07 137 aa12.42□□□□□ -0.42
CENPA-201ENST00000233505 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
CENPA-201ENST00000233505 SDIM1Q6ZPB5 146 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
CENPA-201ENST00000233505 XGP55808 180 aa12.4□□□□□ -0.42
CENPA-201ENST00000233505 SYCNQ0VAF6 134 aa12.4□□□□□ -0.42
CENPA-201ENST00000233505 CARD19Q96LW7 228 aa12.4□□□□□ -0.42
CENPA-201ENST00000233505 FAM30AQ9NZY2 134 aa12.4□□□□□ -0.42
CENPA-201ENST00000233505 PKIGQ9Y2B9 76 aa12.4□□□□□ -0.42
CENPA-201ENST00000233505 IGLC3P0DOY3 106 aa12.39□□□□□ -0.43
CENPA-201ENST00000233505 LINC00526Q96FQ7 95 aa12.39□□□□□ -0.43
CENPA-201ENST00000233505 CDKN2A-AS1Q9UH64 79 aa12.39□□□□□ -0.43
CENPA-201ENST00000233505 FAM19A2Q8N3H0 131 aa12.38□□□□□ -0.43
CENPA-201ENST00000233505 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
CENPA-201ENST00000233505 IFI27L1Q96BM0 104 aa12.38□□□□□ -0.43
CENPA-201ENST00000233505 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
CENPA-201ENST00000233505 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
CENPA-201ENST00000233505 CAMK2N2Q96S95 79 aa12.37□□□□□ -0.43
CENPA-201ENST00000233505 NDUFA6P56556 154 aa12.36□□□□□ -0.43
CENPA-201ENST00000233505 PACRGQ96M98 296 aaPredicted RBP12.36□□□□□ -0.43
CENPA-201ENST00000233505 NUPR1O60356 82 aa12.35□□□□□ -0.43
CENPA-201ENST00000233505 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
CENPA-201ENST00000233505 CIRBPQ14011 172 aaKnown RBP12.35□□□□□ -0.43
CENPA-201ENST00000233505 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
CENPA-201ENST00000233505 Q6ZRU5 148 aa12.35□□□□□ -0.43
CENPA-201ENST00000233505 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
CENPA-201ENST00000233505 MRPL35Q9NZE8 188 aaKnown RBP12.35□□□□□ -0.43
CENPA-201ENST00000233505 NDUFA1O15239 70 aa12.34□□□□□ -0.43
CENPA-201ENST00000233505 COA6Q5JTJ3 125 aaKnown RBP12.34□□□□□ -0.43
CENPA-201ENST00000233505 HSPB8Q9UJY1 196 aa12.34□□□□□ -0.43
CENPA-201ENST00000233505 FAT1Q14517 4588 aa12.33□□□□□ -0.43
CENPA-201ENST00000233505 SMIM1B2RUZ4 78 aa12.33□□□□□ -0.44
CENPA-201ENST00000233505 H3BRM9 83 aa12.33□□□□□ -0.44
CENPA-201ENST00000233505 Q8IZM0 81 aa12.33□□□□□ -0.44
CENPA-201ENST00000233505 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
CENPA-201ENST00000233505 PRSS2P07478 247 aa12.31□□□□□ -0.44
CENPA-201ENST00000233505 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
CENPA-201ENST00000233505 CHTOPQ9Y3Y2 248 aaKnown RBP12.31□□□□□ -0.44
CENPA-201ENST00000233505 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.31□□□□□ -0.44
CENPA-201ENST00000233505 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
CENPA-201ENST00000233505 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
CENPA-201ENST00000233505 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
CENPA-201ENST00000233505 LOC107984640A0A0U1RRK4 108 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms