RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CITED2Q99967 270 aaPredicted RBP10.58□□□□□ -0.72
PRDM4-201ENST00000228437 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
PRDM4-201ENST00000228437 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
PRDM4-201ENST00000228437 RELNP78509 3460 aa10.58□□□□□ -0.72
PRDM4-201ENST00000228437 RBMY1FQ15415 496 aaKnown RBP10.58□□□□□ -0.72
PRDM4-201ENST00000228437 PYGO1Q9Y3Y4 419 aa10.58□□□□□ -0.72
PRDM4-201ENST00000228437 SVEP1Q4LDE5 3571 aa10.57□□□□□ -0.72
PRDM4-201ENST00000228437 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
PRDM4-201ENST00000228437 K7EMT4 169 aa10.57□□□□□ -0.72
PRDM4-201ENST00000228437 FAM218AQ96MZ4 157 aa10.57□□□□□ -0.72
PRDM4-201ENST00000228437 LITAFQ99732 161 aa10.57□□□□□ -0.72
PRDM4-201ENST00000228437 LINC00242Q5T6M2 205 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 Q6ZTI0 123 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 COX7B2Q8TF08 81 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 CHCHD7Q9BUK0 85 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 ORMDL1Q9P0S3 153 aa10.56□□□□□ -0.72
PRDM4-201ENST00000228437 H3BUA1 57 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 UBL5Q9BZL1 73 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 A0A087WYN8 130 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 C18orf65Q6ZTR6 163 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 A6NDX4 124 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 B4DSR2 109 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
PRDM4-201ENST00000228437 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
PRDM4-201ENST00000228437 RPL18AQ02543 176 aaKnown RBP10.54□□□□□ -0.72
PRDM4-201ENST00000228437 ENHOQ6UWT2 76 aa10.54□□□□□ -0.72
PRDM4-201ENST00000228437 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
PRDM4-201ENST00000228437 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
PRDM4-201ENST00000228437 ACANP16112 2415 aa10.54□□□□□ -0.72
PRDM4-201ENST00000228437 C19orf84I3L1E1 186 aa10.53□□□□□ -0.72
PRDM4-201ENST00000228437 HTN3P15516 51 aa10.53□□□□□ -0.72
PRDM4-201ENST00000228437 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
PRDM4-201ENST00000228437 CXCL5P42830 114 aa10.53□□□□□ -0.72
PRDM4-201ENST00000228437 HILS1P60008 231 aa10.53□□□□□ -0.72
PRDM4-201ENST00000228437 LINC00846Q9NV44 126 aa10.52□□□□□ -0.73
PRDM4-201ENST00000228437 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
PRDM4-201ENST00000228437 SMIM1B2RUZ4 78 aa10.52□□□□□ -0.73
PRDM4-201ENST00000228437 BRI3O95415 125 aa10.51□□□□□ -0.73
PRDM4-201ENST00000228437 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
PRDM4-201ENST00000228437 K7EQD1 137 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 AVPP01185 164 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
PRDM4-201ENST00000228437 ESM1Q9NQ30 184 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 PRR3P79522 188 aaKnown RBP10.5□□□□□ -0.73
PRDM4-201ENST00000228437 H0YGX0 51 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
PRDM4-201ENST00000228437 TIMM17BO60830 172 aa10.49□□□□□ -0.73
PRDM4-201ENST00000228437 LINC00337Q8N6G1 96 aa10.48□□□□□ -0.73
PRDM4-201ENST00000228437 SNURFQ9Y675 71 aa10.48□□□□□ -0.73
PRDM4-201ENST00000228437 PSMB8P28062 276 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 LRRC75A-AS1Q8N1F1 130 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 PKIGQ9Y2B9 76 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 CCL18P55774 89 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 FAM19A1Q7Z5A9 133 aa10.47□□□□□ -0.73
PRDM4-201ENST00000228437 DOPEY1Q5JWR5 2465 aa10.46□□□□□ -0.73
PRDM4-201ENST00000228437 WFDC11Q8NEX6 87 aa10.46□□□□□ -0.74
PRDM4-201ENST00000228437 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 F5H768 121 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 CUBNO60494 3623 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 DAD1P61803 113 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 UPK3BQ9BT76 320 aa10.45□□□□□ -0.74
PRDM4-201ENST00000228437 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
PRDM4-201ENST00000228437 SS18Q15532 418 aa10.44□□□□□ -0.74
PRDM4-201ENST00000228437 HECTD1Q9ULT8 2610 aa10.44□□□□□ -0.74
PRDM4-201ENST00000228437 TMEM258P61165 79 aa10.43□□□□□ -0.74
PRDM4-201ENST00000228437 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
PRDM4-201ENST00000228437 ANKRD17O75179 2603 aaKnown RBP10.42□□□□□ -0.74
PRDM4-201ENST00000228437 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
PRDM4-201ENST00000228437 PLA2G2AP14555 144 aa10.42□□□□□ -0.74
PRDM4-201ENST00000228437 WFDC10AQ9H1F0 79 aa10.42□□□□□ -0.74
PRDM4-201ENST00000228437 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
PRDM4-201ENST00000228437 PF4P02776 101 aa10.41□□□□□ -0.74
PRDM4-201ENST00000228437 DCHS2Q6V1P9 2916 aa10.41□□□□□ -0.74
PRDM4-201ENST00000228437 ANGP03950 147 aaKnown RBP10.4□□□□□ -0.74
PRDM4-201ENST00000228437 F8P00451 2351 aa10.4□□□□□ -0.74
PRDM4-201ENST00000228437 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 LINC01356Q8N9X3 169 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
PRDM4-201ENST00000228437 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 C6orf99Q4VX62 202 aa10.39□□□□□ -0.75
PRDM4-201ENST00000228437 A8MTW9 85 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 Q96MF0 132 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 TMEM89A2RUT3 159 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 Q6JHZ5 121 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 BRK1Q8WUW1 75 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 DPH3Q96FX2 82 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 DEFB4AO15263 64 aa10.38□□□□□ -0.75
PRDM4-201ENST00000228437 GYPEP15421 78 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms