RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 NPYP01303 97 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 MGPP08493 103 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 IFI27P40305 119 aaPredicted RBP3.91□□□□□ -1.78
AFP-201ENST00000226359 ZNF876PQ49A33 203 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 MPV17L2Q567V2 206 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 NFE4Q86UQ8 179 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 MRAP2Q96G30 205 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 SCRT2Q9NQ03 307 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
AFP-201ENST00000226359 TRAV8-6A0A0B4J262 113 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 A8MWV9 139 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 RS1O15537 224 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 RNASE3P12724 160 aaKnown RBP3.9□□□□□ -1.78
AFP-201ENST00000226359 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.78
AFP-201ENST00000226359 RPL36ALQ969Q0 106 aaKnown RBP3.9□□□□□ -1.78
AFP-201ENST00000226359 PTH2Q96A98 100 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 TMEM70Q9BUB7 260 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 MAP1LC3CQ9BXW4 147 aa3.9□□□□□ -1.78
AFP-201ENST00000226359 NXT2Q9NPJ8 142 aaKnown RBP3.9□□□□□ -1.78
AFP-201ENST00000226359 RTL8CO15255 209 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 PPP1R17O96001 155 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
AFP-201ENST00000226359 ESRGQ1W209 222 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 GTF2H5Q6ZYL4 71 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 SPATA12Q7Z6I5 190 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 Q8N8P6 123 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 VSIG2Q96IQ7 327 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 PMCHL2Q9BQD1 86 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 K7EQD1 137 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 ATP5LO75964 103 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 HBDP02042 147 aa3.89□□□□□ -1.79
AFP-201ENST00000226359 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
AFP-201ENST00000226359 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 TRAV26-2A0A0B4J265 109 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 TRBV6-4A0A1B0GX49 114 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 SYS1-DBNDD2H3BUS1 97 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
AFP-201ENST00000226359 IGHV3-73A0A0B4J1V6 119 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 C16orf90A8MZG2 172 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 H3BRM9 83 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 PSCAO43653 123 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 CRYGDP07320 174 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 SCGB1A1P11684 91 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 FCER1GP30273 86 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 SEC11AP67812 179 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 LAGE3Q14657 143 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 LYPD5Q6UWN5 251 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 C20orf78Q9BR46 151 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 DNAH17Q9UFH2 4485 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 K7EP34 96 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 LINC00315P59091 139 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 ZNF56Q15929 161 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 ORMDL2Q53FV1 153 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 TMEM97Q5BJF2 176 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 FAM74A4Q5TZK3 123 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 UFSP1Q6NVU6 142 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 ATP6V0E2Q8NHE4 81 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 SMIM2Q9BVW6 85 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 JPT2Q9H910 190 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
AFP-201ENST00000226359 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
AFP-201ENST00000226359 A6NDN8 102 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 LINC01546A6NGU7 62 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 COX8AP10176 69 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 LELP1Q5T871 98 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 SLC25A29Q8N8R3 303 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 IFI27L1Q96BM0 104 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 RPL39LQ96EH5 51 aaKnown RBP3.86□□□□□ -1.79
AFP-201ENST00000226359 GTSF1LQ9H1H1 148 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 KIF25-AS1Q9Y6Z4 181 aa3.86□□□□□ -1.79
AFP-201ENST00000226359 IGHV3-38A0A0C4DH36 116 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 LOC100131303A0A0U1RQF7 123 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 A0A1B0GVY2 172 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 K7EMI3 77 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 RPL36AP83881 106 aaKnown RBP3.85□□□□□ -1.79
AFP-201ENST00000226359 OR5A1Q8NGJ0 315 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 RMI2Q96E14 147 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 MUC4Q99102 2169 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 A0A096LNJ9 63 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 H3BUT2 72 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 H7C1H1 209 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 PRSS1P07477 247 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 DNAH10OSP0CZ25 163 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 LINC01556Q5JQF7 62 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 LINC01545Q5VT33 79 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 C2orf91Q6ZV80 131 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 TNFRSF18Q9Y5U5 241 aa3.85□□□□□ -1.79
AFP-201ENST00000226359 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
AFP-201ENST00000226359 A0A1B0GV72 72 aa3.84□□□□□ -1.79
AFP-201ENST00000226359 RPL32P62910 135 aaKnown RBP3.84□□□□□ -1.79
AFP-201ENST00000226359 SCGB3A1Q96QR1 104 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms