RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
ITGB4-201ENST00000200181 ZNF702PQ9H963 129 aa12.53□□□□□ -0.4
ITGB4-201ENST00000200181 MED13LQ71F56 2210 aa12.52□□□□□ -0.4
ITGB4-201ENST00000200181 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.41
ITGB4-201ENST00000200181 PRM2P04554 102 aa12.52□□□□□ -0.41
ITGB4-201ENST00000200181 BEAN1Q3B7T3 259 aa12.52□□□□□ -0.41
ITGB4-201ENST00000200181 TRBV7-7A0A0K0K1E9 115 aa12.51□□□□□ -0.41
ITGB4-201ENST00000200181 CRIP2P52943 208 aaPredicted RBP12.51□□□□□ -0.41
ITGB4-201ENST00000200181 IGHV6-1A0A0B4J1U7 121 aa12.51□□□□□ -0.41
ITGB4-201ENST00000200181 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
ITGB4-201ENST00000200181 X6R8D5 127 aa12.51□□□□□ -0.41
ITGB4-201ENST00000200181 RPL28P46779 137 aaKnown RBP12.5□□□□□ -0.41
ITGB4-201ENST00000200181 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
ITGB4-201ENST00000200181 IGIPA6NJ69 53 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 PCOTHQ58A44 107 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 A0A087WYN8 130 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 REG3GQ6UW15 175 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 RETNLBQ9BQ08 111 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 TRBV10-3A0A0K0K1G6 114 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 CIRBP-AS1Q8TBR5 109 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 LY6G6CO95867 125 aa12.49□□□□□ -0.41
ITGB4-201ENST00000200181 UNQ6190/PRO20217Q6UXQ8 127 aa12.48□□□□□ -0.41
ITGB4-201ENST00000200181 C18orf65Q6ZTR6 163 aa12.48□□□□□ -0.41
ITGB4-201ENST00000200181 LINC00242Q5T6M2 205 aa12.48□□□□□ -0.41
ITGB4-201ENST00000200181 EGFEM1PQ0D2K5 195 aa12.47□□□□□ -0.41
ITGB4-201ENST00000200181 PRORYQ9H606 182 aa12.47□□□□□ -0.41
ITGB4-201ENST00000200181 Q8N3U1 123 aa12.46□□□□□ -0.41
ITGB4-201ENST00000200181 COL4A3Q01955 1670 aa12.46□□□□□ -0.41
ITGB4-201ENST00000200181 Q8N6K4 173 aa12.46□□□□□ -0.41
ITGB4-201ENST00000200181 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
ITGB4-201ENST00000200181 SPINK1P00995 79 aa12.45□□□□□ -0.42
ITGB4-201ENST00000200181 C11orf71Q6IPW1 123 aa12.45□□□□□ -0.42
ITGB4-201ENST00000200181 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
ITGB4-201ENST00000200181 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
ITGB4-201ENST00000200181 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
ITGB4-201ENST00000200181 TMEM131Q92545 1883 aa12.44□□□□□ -0.42
ITGB4-201ENST00000200181 H0Y9P7 68 aa12.44□□□□□ -0.42
ITGB4-201ENST00000200181 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
ITGB4-201ENST00000200181 CSDC2Q9Y534 153 aaKnown RBP12.43□□□□□ -0.42
ITGB4-201ENST00000200181 NOTCH4Q99466 2003 aa12.43□□□□□ -0.42
ITGB4-201ENST00000200181 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
ITGB4-201ENST00000200181 COX6A2Q02221 97 aa12.42□□□□□ -0.42
ITGB4-201ENST00000200181 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
ITGB4-201ENST00000200181 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
ITGB4-201ENST00000200181 LY6G6DO95868 133 aa12.41□□□□□ -0.42
ITGB4-201ENST00000200181 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
ITGB4-201ENST00000200181 CRYGAP11844 174 aa12.41□□□□□ -0.42
ITGB4-201ENST00000200181 Q9BRP9 147 aa12.4□□□□□ -0.42
ITGB4-201ENST00000200181 ADAMTS9Q9P2N4 1935 aa12.39□□□□□ -0.43
ITGB4-201ENST00000200181 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
ITGB4-201ENST00000200181 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
ITGB4-201ENST00000200181 LINC00310P59036 64 aa12.38□□□□□ -0.43
ITGB4-201ENST00000200181 ZNF106Q9H2Y7 1883 aaKnown RBP12.37□□□□□ -0.43
ITGB4-201ENST00000200181 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
ITGB4-201ENST00000200181 KIF26AQ9ULI4 1882 aaPredicted RBP12.37□□□□□ -0.43
ITGB4-201ENST00000200181 TMEM254Q8TBM7 123 aa12.36□□□□□ -0.43
ITGB4-201ENST00000200181 A0A087WSZ3 146 aa12.36□□□□□ -0.43
ITGB4-201ENST00000200181 ADAMTSL4-AS1Q5T5F5 129 aa12.36□□□□□ -0.43
ITGB4-201ENST00000200181 DEFB116Q30KQ4 102 aa12.35□□□□□ -0.43
ITGB4-201ENST00000200181 NUPR2A6NF83 97 aa12.35□□□□□ -0.43
ITGB4-201ENST00000200181 IGLV4-60A0A075B6I1 120 aa12.35□□□□□ -0.43
ITGB4-201ENST00000200181 HCG22E2RYF7 251 aa12.34□□□□□ -0.43
ITGB4-201ENST00000200181 hDV103S1A0JD37 113 aa12.33□□□□□ -0.44
ITGB4-201ENST00000200181 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
ITGB4-201ENST00000200181 KIAA1549Q9HCM3 1950 aa12.32□□□□□ -0.44
ITGB4-201ENST00000200181 IGLV5-52A0A0A0MRZ9 124 aa12.32□□□□□ -0.44
ITGB4-201ENST00000200181 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
ITGB4-201ENST00000200181 SBSPONQ8IVN8 264 aa12.31□□□□□ -0.44
ITGB4-201ENST00000200181 EDN2P20800 178 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 MED12LQ86YW9 2145 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 ZNF580Q9UK33 172 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 AMELXQ99217 191 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
ITGB4-201ENST00000200181 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
ITGB4-201ENST00000200181 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
ITGB4-201ENST00000200181 Q9UF83 564 aa12.29□□□□□ -0.44
ITGB4-201ENST00000200181 OXLD1Q5BKU9 147 aa12.29□□□□□ -0.44
ITGB4-201ENST00000200181 LINC00846Q9NV44 126 aa12.28□□□□□ -0.44
ITGB4-201ENST00000200181 F8WDY8 70 aa12.27□□□□□ -0.44
ITGB4-201ENST00000200181 FHL2Q14192 279 aa12.27□□□□□ -0.44
ITGB4-201ENST00000200181 PRO0628Q9UI54 55 aa12.27□□□□□ -0.45
ITGB4-201ENST00000200181 C1orf64Q8NEQ6 169 aa12.26□□□□□ -0.45
ITGB4-201ENST00000200181 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
ITGB4-201ENST00000200181 PTPRQQ9UMZ3 2332 aa12.25□□□□□ -0.45
ITGB4-201ENST00000200181 FAM208BQ5VWN6 2430 aa12.24□□□□□ -0.45
ITGB4-201ENST00000200181 CXCL6P80162 114 aa12.24□□□□□ -0.45
ITGB4-201ENST00000200181 C2orf48Q96LS8 159 aa12.23□□□□□ -0.45
ITGB4-201ENST00000200181 TANC2Q9HCD6 1990 aa12.23□□□□□ -0.45
ITGB4-201ENST00000200181 SORL1Q92673 2214 aa12.22□□□□□ -0.45
ITGB4-201ENST00000200181 PRR14LQ5THK1 2151 aa12.21□□□□□ -0.45
ITGB4-201ENST00000200181 A8MTW9 85 aa12.21□□□□□ -0.45
ITGB4-201ENST00000200181 A0A1B0GU69 56 aa12.21□□□□□ -0.45
ITGB4-201ENST00000200181 C2orf16Q68DN1 1984 aa12.21□□□□□ -0.45
ITGB4-201ENST00000200181 Q6ZTC4 211 aa12.21□□□□□ -0.46
ITGB4-201ENST00000200181 C7orf65Q6ZTY9 151 aa12.21□□□□□ -0.46
ITGB4-201ENST00000200181 BRI3O95415 125 aa12.21□□□□□ -0.46
ITGB4-201ENST00000200181 NUP210LQ5VU65 1888 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms