RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
MRPL28-201ENST00000199706 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
MRPL28-201ENST00000199706 OPRPNQ99935 248 aaPredicted RBP11.18□□□□□ -0.62
MRPL28-201ENST00000199706 TGIF2-C20orf24A0A0A6YYL0 155 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 HAMPP81172 84 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 FABP9Q0Z7S8 132 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 OR10D4PQ8NGN7 298 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 CIRBP-AS1Q8TBR5 109 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 AMELXQ99217 191 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
MRPL28-201ENST00000199706 F8WDY8 70 aa11.16□□□□□ -0.62
MRPL28-201ENST00000199706 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
MRPL28-201ENST00000199706 YPEL4Q96NS1 127 aa11.16□□□□□ -0.62
MRPL28-201ENST00000199706 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
MRPL28-201ENST00000199706 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
MRPL28-201ENST00000199706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
MRPL28-201ENST00000199706 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
MRPL28-201ENST00000199706 UBE2D1P51668 147 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 LINC00242Q5T6M2 205 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 LINC00173Q6ZV60 143 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 ERASQ7Z444 233 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 VCX2Q9H322 139 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
MRPL28-201ENST00000199706 A0A087WZ39 114 aa11.13□□□□□ -0.63
MRPL28-201ENST00000199706 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
MRPL28-201ENST00000199706 LINC00528Q8N1L1 170 aa11.13□□□□□ -0.63
MRPL28-201ENST00000199706 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
MRPL28-201ENST00000199706 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
MRPL28-201ENST00000199706 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
MRPL28-201ENST00000199706 C5orf38Q86SI9 138 aa11.12□□□□□ -0.63
MRPL28-201ENST00000199706 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
MRPL28-201ENST00000199706 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
MRPL28-201ENST00000199706 SEC11AP67812 179 aa11.11□□□□□ -0.63
MRPL28-201ENST00000199706 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
MRPL28-201ENST00000199706 PANO1I0J062 215 aa11.1□□□□□ -0.63
MRPL28-201ENST00000199706 COX6A2Q02221 97 aa11.1□□□□□ -0.63
MRPL28-201ENST00000199706 SPAG11BQ08648 103 aa11.1□□□□□ -0.63
MRPL28-201ENST00000199706 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
MRPL28-201ENST00000199706 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
MRPL28-201ENST00000199706 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
MRPL28-201ENST00000199706 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
MRPL28-201ENST00000199706 LINC00526Q96FQ7 95 aa11.08□□□□□ -0.64
MRPL28-201ENST00000199706 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
MRPL28-201ENST00000199706 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
MRPL28-201ENST00000199706 RAB5BP61020 215 aa11.07□□□□□ -0.64
MRPL28-201ENST00000199706 HERVK_113P63121 156 aa11.07□□□□□ -0.64
MRPL28-201ENST00000199706 MRPL35Q9NZE8 188 aaKnown RBP11.07□□□□□ -0.64
MRPL28-201ENST00000199706 LINC00614P0C842 121 aa11.06□□□□□ -0.64
MRPL28-201ENST00000199706 Q6ZRU5 148 aa11.06□□□□□ -0.64
MRPL28-201ENST00000199706 SLC7A5P1Q8MH63 180 aa11.06□□□□□ -0.64
MRPL28-201ENST00000199706 A0A087WYN8 130 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 NDUFA1O15239 70 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
MRPL28-201ENST00000199706 A0A096LNI7 61 aa11.04□□□□□ -0.64
MRPL28-201ENST00000199706 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
MRPL28-201ENST00000199706 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
MRPL28-201ENST00000199706 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
MRPL28-201ENST00000199706 URB1-AS1Q96HZ7 61 aa11.04□□□□□ -0.64
MRPL28-201ENST00000199706 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
MRPL28-201ENST00000199706 A0A096LNJ9 63 aa11.03□□□□□ -0.64
MRPL28-201ENST00000199706 HBDP02042 147 aa11.03□□□□□ -0.64
MRPL28-201ENST00000199706 FLG2Q5D862 2391 aaPredicted RBP11.03□□□□□ -0.64
MRPL28-201ENST00000199706 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
MRPL28-201ENST00000199706 TLX1NBP0CAT3 122 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 PTTG1IPP53801 180 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 PMVKQ15126 192 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 GEMIN7Q9H840 131 aaKnown RBP11.02□□□□□ -0.65
MRPL28-201ENST00000199706 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
MRPL28-201ENST00000199706 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
MRPL28-201ENST00000199706 MAJINQ3KP22 176 aa11.01□□□□□ -0.65
MRPL28-201ENST00000199706 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
MRPL28-201ENST00000199706 TRBV30A0A0K0K1B3 111 aa11□□□□□ -0.65
MRPL28-201ENST00000199706 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
MRPL28-201ENST00000199706 Q8IZM0 81 aa11□□□□□ -0.65
MRPL28-201ENST00000199706 DPH3Q96FX2 82 aa11□□□□□ -0.65
MRPL28-201ENST00000199706 CDKN2A-AS1Q9UH64 79 aa11□□□□□ -0.65
MRPL28-201ENST00000199706 ATP5LO75964 103 aa10.99□□□□□ -0.65
MRPL28-201ENST00000199706 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
MRPL28-201ENST00000199706 STPG4Q8N801 248 aa10.99□□□□□ -0.65
MRPL28-201ENST00000199706 DMBT1Q9UGM3 2413 aaPredicted RBP10.98□□□□□ -0.65
MRPL28-201ENST00000199706 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
MRPL28-201ENST00000199706 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
MRPL28-201ENST00000199706 C7orf33Q8WU49 177 aa10.97□□□□□ -0.65
MRPL28-201ENST00000199706 C6orf48Q9UBA6 75 aa10.97□□□□□ -0.65
MRPL28-201ENST00000199706 PRSS2P07478 247 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 CXCL5P42830 114 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 C10orf25Q5T742 122 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 LINC00469Q8N7U9 141 aa10.96□□□□□ -0.65
MRPL28-201ENST00000199706 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms