RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 OR5A1Q8NGJ0 315 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 FAM213BQ8TBF2 198 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 TRBV20OR9-2A0A075B6H5 130 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 CCL25O15444 150 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 CCL20P78556 96 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 SYCNQ0VAF6 134 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 PEA15Q15121 130 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 FAM74A3Q4VXF1 159 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
LINC00339-212ENST00000642072 AMMECR1LQ6DCA0 310 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 RNASEKQ6P5S7 137 aaKnown RBP5.21□□□□□ -1.58
LINC00339-212ENST00000642072 PRR26Q8N8Z3 221 aa5.21□□□□□ -1.58
LINC00339-212ENST00000642072 RPL39LQ96EH5 51 aaKnown RBP5.21□□□□□ -1.58
LINC00339-212ENST00000642072 ZNF25P17030 456 aaPredicted RBP5.2□□□□□ -1.58
LINC00339-212ENST00000642072 SMIM12Q96EX1 92 aa5.2□□□□□ -1.58
LINC00339-212ENST00000642072 IGLV4-69A0A075B6H9 119 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 SDHAF1A6NFY7 115 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 IFNA1P01562 189 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 APCSP02743 223 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 ESDP10768 282 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 CAMPP49913 170 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 FOXA3P55318 350 aaPredicted RBP5.19□□□□□ -1.58
LINC00339-212ENST00000642072 SRSF3P84103 164 aaKnown RBP5.19□□□□□ -1.58
LINC00339-212ENST00000642072 C9orf116Q5BN46 136 aaPredicted RBP5.19□□□□□ -1.58
LINC00339-212ENST00000642072 CD164L2Q6UWJ8 174 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 SMCO4Q9NRQ5 59 aa5.19□□□□□ -1.58
LINC00339-212ENST00000642072 TRAV1-1A0A0B4J248 108 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 XKRY2A2RUG3 117 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.18□□□□□ -1.58
LINC00339-212ENST00000642072 ZNF561-AS1K7EIQ3 104 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 TSHBP01222 138 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 MT-ND6P03923 174 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 BCL2P10415 239 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 MEF2BQ02080 365 aaPredicted RBP5.18□□□□□ -1.58
LINC00339-212ENST00000642072 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 RHEBQ15382 184 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 TWIST1Q15672 202 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 C1orf137Q5JT78 98 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
LINC00339-212ENST00000642072 MRPL52Q86TS9 123 aaKnown RBP5.18□□□□□ -1.58
LINC00339-212ENST00000642072 KRTAP11-1Q8IUC1 163 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 NUP35Q8NFH5 326 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 MANBALQ9NQG1 85 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 CDC42SE2Q9NRR3 84 aa5.18□□□□□ -1.58
LINC00339-212ENST00000642072 TRBV6-5A0A0K0K1A5 114 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 COLCA2A8K830 154 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 C9JQL5 133 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 H0Y9J4 135 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 APOMO95445 188 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 IGLV7-43P04211 117 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 GNG4P50150 75 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 NUDT10Q8NFP7 164 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 DIRC1Q969H9 104 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 NUDT11Q96G61 164 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 BIN3Q9NQY0 253 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 GNG13Q9P2W3 67 aa5.17□□□□□ -1.58
LINC00339-212ENST00000642072 I3L3M4 83 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 MT-ND4LP03901 98 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 CBLN2Q8IUK8 224 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 ISOC2Q96AB3 205 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 TMEM101Q96IK0 257 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 BTF3L4Q96K17 158 aa5.16□□□□□ -1.58
LINC00339-212ENST00000642072 RNASE7Q9H1E1 156 aaKnown RBP5.16□□□□□ -1.58
LINC00339-212ENST00000642072 IGLV1-50A0A075B6I6 118 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 C7orf77A4D0Y5 90 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 K7EN84 100 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 TAGLN2P37802 199 aaKnown RBP5.15□□□□□ -1.59
LINC00339-212ENST00000642072 SS18Q15532 418 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 LINC00518Q8N0U6 118 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 EIF5A2Q9GZV4 153 aaKnown RBP5.15□□□□□ -1.59
LINC00339-212ENST00000642072 RPP21Q9H633 154 aaKnown RBP5.15□□□□□ -1.59
LINC00339-212ENST00000642072 TMEM242Q9NWH2 141 aa5.15□□□□□ -1.59
LINC00339-212ENST00000642072 TRBV27A0A0K0K1C4 114 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 A0A0U1RQV1 116 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 COX7A2LO14548 114 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 PDE6DO43924 150 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 SRP19P09132 144 aaKnown RBP5.14□□□□□ -1.59
LINC00339-212ENST00000642072 POLR2KP53803 58 aaKnown RBP5.14□□□□□ -1.59
LINC00339-212ENST00000642072 RAB5BP61020 215 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 RNF151Q2KHN1 245 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 MRAP2Q96G30 205 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 YPEL4Q96NS1 127 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 CAMK2N2Q96S95 79 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
LINC00339-212ENST00000642072 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 FAM168BA1KXE4 195 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 C1orf196B1AJZ1 125 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 PMCHP20382 165 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 S100A12P80511 92 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 RPL18AQ02543 176 aaKnown RBP5.13□□□□□ -1.59
LINC00339-212ENST00000642072 PNRC1Q12796 327 aaPredicted RBP5.13□□□□□ -1.59
LINC00339-212ENST00000642072 PRR4Q16378 134 aa5.13□□□□□ -1.59
LINC00339-212ENST00000642072 OPRPNQ99935 248 aaPredicted RBP5.13□□□□□ -1.59
LINC00339-212ENST00000642072 RPS10P5Q9NQ39 176 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms