RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
PHGDH-219ENST00000641513 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
PHGDH-219ENST00000641513 PRB2P02812 416 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-219ENST00000641513 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
PHGDH-219ENST00000641513 C12orf74Q32Q52 190 aa6.3□□□□□ -1.4
PHGDH-219ENST00000641513 ZNRF2Q8NHG8 242 aa6.3□□□□□ -1.4
PHGDH-219ENST00000641513 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
PHGDH-219ENST00000641513 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
PHGDH-219ENST00000641513 RETNQ9HD89 108 aa6.3□□□□□ -1.4
PHGDH-219ENST00000641513 IGHV3-38A0A0C4DH36 116 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 ZNF815PA8K554 130 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 LYRM9A8MSI8 78 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 A8MZ25 164 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 IGLL5B9A064 214 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 CIDEAO60543 219 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 UBE2D1P51668 147 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 DAD1P61803 113 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 GAGE4Q13068 117 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 GAGE5Q13069 117 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 LYRM7Q5U5X0 104 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 SLC25A29Q8N8R3 303 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
PHGDH-219ENST00000641513 Q9UF83 564 aa6.29□□□□□ -1.4
PHGDH-219ENST00000641513 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
PHGDH-219ENST00000641513 COTL1Q14019 142 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 DEFB121Q5J5C9 76 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 Q8NAQ8 132 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 AMELXQ99217 191 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
PHGDH-219ENST00000641513 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 A0A0J9YY99 117 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 F8W1H4 67 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 LEPROTO15243 131 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 HTN3P15516 51 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 TCTAP57738 103 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 FHL2Q14192 279 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 TIMM21Q9BVV7 248 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 TRRAPQ9Y4A5 3859 aa6.27□□□□□ -1.41
PHGDH-219ENST00000641513 IGLV4-3A0A075B6K6 122 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 TRBV6-4A0A1B0GX49 114 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 J3QQQ9 107 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
PHGDH-219ENST00000641513 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 CELA1Q9UNI1 258 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
PHGDH-219ENST00000641513 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
PHGDH-219ENST00000641513 DAZ4Q86SG3 579 aaKnown RBP6.25□□□□□ -1.41
PHGDH-219ENST00000641513 MRAPQ8TCY5 172 aa6.25□□□□□ -1.41
PHGDH-219ENST00000641513 VCX2Q9H322 139 aa6.25□□□□□ -1.41
PHGDH-219ENST00000641513 DAZ3Q9NR90 486 aaKnown RBP6.25□□□□□ -1.41
PHGDH-219ENST00000641513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-219ENST00000641513 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-219ENST00000641513 F5H768 121 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 K7EIL1 84 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 K7ERJ3 54 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 PAX4O43316 350 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 ATP5G1P05496 136 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 GYPEP15421 78 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-219ENST00000641513 LGALS3P17931 250 aaKnown RBP6.24□□□□□ -1.41
PHGDH-219ENST00000641513 UBE2D3P61077 147 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 UBE2D2P62837 147 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
PHGDH-219ENST00000641513 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 A0A0B4J2C4 111 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 TEX48A0A1B0GUV7 120 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 TINCRA0A1B0GVN0 87 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 UBE2L6O14933 153 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 IGHV3-30P01768 117 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 IGHV3-30-5P0DP03 117 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
PHGDH-219ENST00000641513 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 SBSPONQ8IVN8 264 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
PHGDH-219ENST00000641513 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 J3QR89 54 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 M0QXV9 152 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 TIMM17BO60830 172 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 TSPEAR-AS2P59090 65 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
PHGDH-219ENST00000641513 DGAT2L7PQ6IED9 249 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 OPRPNQ99935 248 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-219ENST00000641513 SPATA25Q9BR10 227 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 PPDPFQ9H3Y8 114 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 UBE2D4Q9Y2X8 147 aa6.22□□□□□ -1.41
PHGDH-219ENST00000641513 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
PHGDH-219ENST00000641513 PKD1L1Q8TDX9 2849 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms