RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
PHGDH-212ENST00000641247 A0A0J9YX75 114 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 PLAC8L1A1L4L8 177 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 DPM2O94777 84 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 NMUP48645 174 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 CRIP1P50238 77 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 LINC00315P59091 139 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 FOXI1Q12951 378 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 MRPL23Q16540 153 aaKnown RBP6.67□□□□□ -1.34
PHGDH-212ENST00000641247 ESRGQ1W209 222 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 RRN3P1Q2M238 152 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 Q6ZSN1 163 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE7O76087 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 DUSP14O95147 198 aaKnown RBP6.66□□□□□ -1.34
PHGDH-212ENST00000641247 IGKCP01834 107 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE12FP0CL80 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE12GP0CL81 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE12IP0CL82 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 PLNP26678 52 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 GAGE4Q13068 117 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 SERTAD4-AS1Q5TG53 156 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 PRELID3AQ96N28 172 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 MAP1LC3AQ9H492 121 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
PHGDH-212ENST00000641247 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 FABP5P3A8MUU1 101 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 SH2D1AO60880 128 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 FCER1GP30273 86 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 ZNF80P51504 273 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-212ENST00000641247 CACNG7P62955 275 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 WFDC2Q14508 124 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 ETDBQ3ZM63 59 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 TTC32Q5I0X7 151 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.34
PHGDH-212ENST00000641247 NHP2Q9NX24 153 aaKnown RBP6.65□□□□□ -1.34
PHGDH-212ENST00000641247 LEPP41159 167 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 GAGE2EQ4V326 116 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 UPK3BQ9BT76 320 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 GAGE2DQ9UEU5 116 aa6.64□□□□□ -1.35
PHGDH-212ENST00000641247 A0A087WTM6 91 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 LYRM9A8MSI8 78 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 A8MTW9 85 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 A8MWV9 139 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 KLLNB2CW77 178 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 K7EMI3 77 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 SNCGO76070 127 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 PRSS1P07477 247 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 PRR9Q5T870 116 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 Q6ZUT4 128 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 TEN1Q86WV5 123 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 SYT8Q8NBV8 401 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 HIST1H4GQ99525 98 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 SPXQ9BT56 116 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 FAM30AQ9NZY2 134 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
PHGDH-212ENST00000641247 TRBV25-1A0A075B6N4 114 aa6.62□□□□□ -1.35
PHGDH-212ENST00000641247 TRAV21A0A0B4J279 112 aa6.62□□□□□ -1.35
PHGDH-212ENST00000641247 SNAI2O43623 268 aa6.62□□□□□ -1.35
PHGDH-212ENST00000641247 CKS2P33552 79 aa6.62□□□□□ -1.35
PHGDH-212ENST00000641247 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
PHGDH-212ENST00000641247 A0A0J9YY99 117 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 J3KRW8 73 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 ORM1P02763 201 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 ATP5G1P05496 136 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 IFITM1P13164 125 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 RNASE4P34096 147 aaKnown RBP6.61□□□□□ -1.35
PHGDH-212ENST00000641247 IFI27P40305 119 aaPredicted RBP6.61□□□□□ -1.35
PHGDH-212ENST00000641247 TIMM8BQ9Y5J9 83 aaPredicted RBP6.61□□□□□ -1.35
PHGDH-212ENST00000641247 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
PHGDH-212ENST00000641247 TMSB15BA0A087X1C1 80 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 IGKV3D-20A0A0C4DH25 116 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 RHODO00212 210 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 FXYD2P54710 66 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 SPINK13Q1W4C9 94 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 CFAP126Q5VTH2 177 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 C11orf21Q9P2W6 132 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
PHGDH-212ENST00000641247 TRAV12-3A0A0B4J271 114 aa6.59□□□□□ -1.35
PHGDH-212ENST00000641247 MYMXA0A1B0GTQ4 84 aa6.59□□□□□ -1.35
PHGDH-212ENST00000641247 Q6ZQT7 251 aa6.59□□□□□ -1.35
PHGDH-212ENST00000641247 RNF213Q63HN8 5207 aa6.59□□□□□ -1.36
PHGDH-212ENST00000641247 TRAV12-2A0A075B6T6 113 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 D6R8Y8 96 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 H7C1H1 209 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 NCR2O95944 276 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 PPP1R17O96001 155 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms