RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 IGLV5-45A0A087WSX0 123 aa9.93□□□□□ -0.82
PAX6-280ENST00000640872 DAND5Q8N907 189 aa9.93□□□□□ -0.82
PAX6-280ENST00000640872 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
PAX6-280ENST00000640872 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
PAX6-280ENST00000640872 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
PAX6-280ENST00000640872 TRBV7-7A0A0K0K1E9 115 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 A8MTW9 85 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 CUBNO60494 3623 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 PRM2P04554 102 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 TIRAPP58753 221 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.92□□□□□ -0.82
PAX6-280ENST00000640872 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
PAX6-280ENST00000640872 RBMY1BA6NDE4 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-280ENST00000640872 RBMY1EA6NEQ0 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-280ENST00000640872 IGHV4-59P01825 116 aa9.91□□□□□ -0.82
PAX6-280ENST00000640872 RBMY1DP0C7P1 496 aaKnown RBP9.91□□□□□ -0.82
PAX6-280ENST00000640872 ZNF843Q8N446 348 aa9.91□□□□□ -0.82
PAX6-280ENST00000640872 MAPK1IP1LQ8NDC0 245 aa9.9□□□□□ -0.82
PAX6-280ENST00000640872 CREBBPQ92793 2442 aa9.9□□□□□ -0.82
PAX6-280ENST00000640872 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
PAX6-280ENST00000640872 SORL1Q92673 2214 aa9.9□□□□□ -0.83
PAX6-280ENST00000640872 IGHV3-38A0A0C4DH36 116 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 HOXD3P31249 432 aaPredicted RBP9.89□□□□□ -0.83
PAX6-280ENST00000640872 ZNF415Q09FC8 603 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 DNAJC30Q96LL9 226 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 MYO9AB2RTY4 2548 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 NF1P21359 2839 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 IGHV3-53P01767 116 aa9.89□□□□□ -0.83
PAX6-280ENST00000640872 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 DEFB131AP59861 70 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 CFAP161Q6P656 301 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 COX7A2LO14548 114 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 COX6A2Q02221 97 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
PAX6-280ENST00000640872 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
PAX6-280ENST00000640872 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 Q9H8V8 135 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 IGHV3OR16-12A0A075B7B8 117 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 ACYP1P07311 99 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 SHISA2Q6UWI4 295 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 CHCHD5Q9BSY4 110 aa9.87□□□□□ -0.83
PAX6-280ENST00000640872 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
PAX6-280ENST00000640872 SOSTDC1Q6X4U4 206 aa9.86□□□□□ -0.83
PAX6-280ENST00000640872 B4DSR2 109 aa9.86□□□□□ -0.83
PAX6-280ENST00000640872 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
PAX6-280ENST00000640872 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
PAX6-280ENST00000640872 KRTAP10-9P60411 292 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 HERVK_113P63121 156 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 Q8N2B8 174 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 FAM110AQ9BQ89 295 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 SONP18583 2426 aaKnown RBP9.85□□□□□ -0.83
PAX6-280ENST00000640872 RS1O15537 224 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 FAM19A3Q7Z5A8 133 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 UBE2E2Q96LR5 201 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 IMUPQ9GZP8 106 aa9.85□□□□□ -0.83
PAX6-280ENST00000640872 AKAP9Q99996 3911 aa9.84□□□□□ -0.83
PAX6-280ENST00000640872 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
PAX6-280ENST00000640872 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
PAX6-280ENST00000640872 DGAT2L7PQ6IED9 249 aa9.83□□□□□ -0.84
PAX6-280ENST00000640872 SMCR5Q8TEV8 140 aa9.83□□□□□ -0.84
PAX6-280ENST00000640872 KMT2BQ9UMN6 2715 aaPredicted RBP9.83□□□□□ -0.84
PAX6-280ENST00000640872 ITPR3Q14573 2671 aa9.83□□□□□ -0.84
PAX6-280ENST00000640872 SMIM20Q8N5G0 67 aa9.83□□□□□ -0.84
PAX6-280ENST00000640872 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 TRACP01848 142 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 COPS9Q8WXC6 57 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 LINC01587Q99440 93 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 SLURP1P55000 103 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 SDIM1Q6ZPB5 146 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 C22orf24Q9Y442 160 aa9.82□□□□□ -0.84
PAX6-280ENST00000640872 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 LINC00694P0DN24 101 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 ZNF702PQ9H963 129 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 A0A096LNT2 108 aa9.81□□□□□ -0.84
PAX6-280ENST00000640872 DAZ2Q13117 558 aaKnown RBP9.81□□□□□ -0.84
PAX6-280ENST00000640872 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
PAX6-280ENST00000640872 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
PAX6-280ENST00000640872 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
PAX6-280ENST00000640872 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
PAX6-280ENST00000640872 NDUFA7O95182 113 aa9.8□□□□□ -0.84
PAX6-280ENST00000640872 LINC00643Q86TS7 51 aa9.8□□□□□ -0.84
PAX6-280ENST00000640872 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
PAX6-280ENST00000640872 DEFB136Q30KP8 78 aa9.8□□□□□ -0.84
PAX6-280ENST00000640872 C18orf65Q6ZTR6 163 aa9.8□□□□□ -0.84
PAX6-280ENST00000640872 MAP6D1Q9H9H5 199 aa9.8□□□□□ -0.84
PAX6-280ENST00000640872 F5H768 121 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 FAM218AQ96MZ4 157 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 PPDPFQ9H3Y8 114 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 VPREB3Q9UKI3 123 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
PAX6-280ENST00000640872 FLNAP21333 2647 aaKnown RBP9.79□□□□□ -0.84
PAX6-280ENST00000640872 INSP01308 110 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
PAX6-280ENST00000640872 HERV-K104P63124 156 aa9.78□□□□□ -0.84
PAX6-280ENST00000640872 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms