RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 HIST1H2BOP23527 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BBP33778 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BDP58876 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BCP62807 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 REG3AQ06141 175 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST2H2BEQ16778 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 NFE4Q86UQ8 179 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BHQ93079 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BNQ99877 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HIST1H2BMQ99879 126 aa14.53□□□□□ -0.08
TSPAN9-208ENST00000640568 HSBP1O75506 76 aa14.52□□□□□ -0.08
TSPAN9-208ENST00000640568 TOMM6Q96B49 74 aa14.52□□□□□ -0.08
TSPAN9-208ENST00000640568 CDC42SE2Q9NRR3 84 aa14.52□□□□□ -0.08
TSPAN9-208ENST00000640568 IGKV3OR2-268A0A0C4DH90 116 aa14.51□□□□□ -0.09
TSPAN9-208ENST00000640568 HBDP02042 147 aa14.51□□□□□ -0.09
TSPAN9-208ENST00000640568 ZNF664Q8N3J9 261 aa14.51□□□□□ -0.09
TSPAN9-208ENST00000640568 RMI2Q96E14 147 aa14.51□□□□□ -0.09
TSPAN9-208ENST00000640568 PYGO1Q9Y3Y4 419 aa14.51□□□□□ -0.09
TSPAN9-208ENST00000640568 MIAQ16674 131 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 Q6ZUT4 128 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 PRR34Q9NV39 138 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 DNAH2Q9P225 4427 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 ENHOQ6UWT2 76 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 SCGB3A1Q96QR1 104 aa14.5□□□□□ -0.09
TSPAN9-208ENST00000640568 SERF1AO75920 110 aa14.49□□□□□ -0.09
TSPAN9-208ENST00000640568 RNASE13Q5GAN3 156 aaKnown RBP14.49□□□□□ -0.09
TSPAN9-208ENST00000640568 Q6ZN92 141 aa14.49□□□□□ -0.09
TSPAN9-208ENST00000640568 IGKV2D-24A0A075B6R9 120 aa14.48□□□□□ -0.09
TSPAN9-208ENST00000640568 MRPS36P82909 103 aaKnown RBP14.48□□□□□ -0.09
TSPAN9-208ENST00000640568 C1orf43Q9BWL3 253 aa14.48□□□□□ -0.09
TSPAN9-208ENST00000640568 TMEM141Q96I45 108 aa14.47□□□□□ -0.09
TSPAN9-208ENST00000640568 TIMM17AQ99595 171 aa14.47□□□□□ -0.09
TSPAN9-208ENST00000640568 OPRPNQ99935 248 aaPredicted RBP14.47□□□□□ -0.09
TSPAN9-208ENST00000640568 TM2D2Q9BX73 214 aa14.47□□□□□ -0.09
TSPAN9-208ENST00000640568 IGLV4-3A0A075B6K6 122 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 PSCAO43653 123 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 NPSP0C0P6 89 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 PAPPA-AS1Q5QFB9 102 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 ERASQ7Z444 233 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 COX11Q9Y6N1 276 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 DNAH10Q8IVF4 4471 aa14.46□□□□□ -0.09
TSPAN9-208ENST00000640568 RYR3Q15413 4870 aa14.45□□□□□ -0.1
TSPAN9-208ENST00000640568 TRAV8-4A0A0B4J246 113 aa14.45□□□□□ -0.1
TSPAN9-208ENST00000640568 IGIPA6NJ69 53 aa14.45□□□□□ -0.1
TSPAN9-208ENST00000640568 IGLV10-54A0A075B6I4 117 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 A0A096LNJ9 63 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 TEX43Q6ZNM6 134 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 C2orf88Q9BSF0 95 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 SS18Q15532 418 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 FAM19A2Q8N3H0 131 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 VCX2Q9H322 139 aa14.44□□□□□ -0.1
TSPAN9-208ENST00000640568 IFITM10A6NMD0 228 aa14.43□□□□□ -0.1
TSPAN9-208ENST00000640568 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.43□□□□□ -0.1
TSPAN9-208ENST00000640568 NDUFA6P56556 154 aa14.43□□□□□ -0.1
TSPAN9-208ENST00000640568 LINC00310P59036 64 aa14.43□□□□□ -0.1
TSPAN9-208ENST00000640568 TRAV13-1A0A0B4J241 112 aa14.42□□□□□ -0.1
TSPAN9-208ENST00000640568 LINC00959A0A1B0GUT2 108 aa14.42□□□□□ -0.1
TSPAN9-208ENST00000640568 FRAS1Q86XX4 4008 aa14.42□□□□□ -0.1
TSPAN9-208ENST00000640568 ATP5LO75964 103 aa14.41□□□□□ -0.1
TSPAN9-208ENST00000640568 FAM104AQ969W3 186 aa14.41□□□□□ -0.1
TSPAN9-208ENST00000640568 NUPR1O60356 82 aa14.4□□□□□ -0.1
TSPAN9-208ENST00000640568 PDZD11Q5EBL8 140 aa14.4□□□□□ -0.1
TSPAN9-208ENST00000640568 Q6ZRN7 208 aaPredicted RBP14.4□□□□□ -0.1
TSPAN9-208ENST00000640568 RTL8CO15255 209 aa14.39□□□□□ -0.11
TSPAN9-208ENST00000640568 CCL25O15444 150 aa14.39□□□□□ -0.11
TSPAN9-208ENST00000640568 CHCHD10Q8WYQ3 142 aaPredicted RBP14.39□□□□□ -0.11
TSPAN9-208ENST00000640568 AMELXQ99217 191 aa14.38□□□□□ -0.11
TSPAN9-208ENST00000640568 DNAH17Q9UFH2 4485 aa14.38□□□□□ -0.11
TSPAN9-208ENST00000640568 LEPROTL1O95214 131 aa14.38□□□□□ -0.11
TSPAN9-208ENST00000640568 XCL1P47992 114 aa14.38□□□□□ -0.11
TSPAN9-208ENST00000640568 ZC2HC1BQ5TFG8 222 aa14.38□□□□□ -0.11
TSPAN9-208ENST00000640568 COA6Q5JTJ3 125 aaKnown RBP14.37□□□□□ -0.11
TSPAN9-208ENST00000640568 LINC00336Q6ZUF6 198 aa14.37□□□□□ -0.11
TSPAN9-208ENST00000640568 BAALCQ8WXS3 180 aa14.37□□□□□ -0.11
TSPAN9-208ENST00000640568 GAGE12HA6NDE8 117 aa14.36□□□□□ -0.11
TSPAN9-208ENST00000640568 S100A6P06703 90 aa14.36□□□□□ -0.11
TSPAN9-208ENST00000640568 LINC00173Q6ZV60 143 aa14.36□□□□□ -0.11
TSPAN9-208ENST00000640568 PMVKQ15126 192 aa14.35□□□□□ -0.11
TSPAN9-208ENST00000640568 IFI27L1Q96BM0 104 aa14.35□□□□□ -0.11
TSPAN9-208ENST00000640568 HSPB8Q9UJY1 196 aa14.35□□□□□ -0.11
TSPAN9-208ENST00000640568 PRSS29PA6NIE9 313 aa14.34□□□□□ -0.11
TSPAN9-208ENST00000640568 PRSS1P07477 247 aa14.33□□□□□ -0.12
TSPAN9-208ENST00000640568 FABP4P15090 132 aa14.33□□□□□ -0.12
TSPAN9-208ENST00000640568 UBE2D1P51668 147 aa14.33□□□□□ -0.12
TSPAN9-208ENST00000640568 CD164L2Q6UWJ8 174 aa14.33□□□□□ -0.12
TSPAN9-208ENST00000640568 TNP2Q05952 138 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 KRTAP26-1Q6PEX3 210 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 CST9LQ9H4G1 147 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 EREGO14944 169 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 SEC11AP67812 179 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 FOXI1Q12951 378 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 MAPKAPK5-AS1Q8N8E1 139 aa14.31□□□□□ -0.12
TSPAN9-208ENST00000640568 LECT2O14960 151 aa14.29□□□□□ -0.12
TSPAN9-208ENST00000640568 LINC00242Q5T6M2 205 aa14.29□□□□□ -0.12
TSPAN9-208ENST00000640568 FAT2Q9NYQ8 4349 aa14.28□□□□□ -0.12
TSPAN9-208ENST00000640568 H0Y8G0 127 aa14.28□□□□□ -0.12
TSPAN9-208ENST00000640568 COX7A2LO14548 114 aa14.28□□□□□ -0.12
TSPAN9-208ENST00000640568 PACRGQ96M98 296 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms