RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
PAX6-268ENST00000640287 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
PAX6-268ENST00000640287 C2orf66Q6UXQ4 117 aa10.18□□□□□ -0.78
PAX6-268ENST00000640287 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
PAX6-268ENST00000640287 COX11Q9Y6N1 276 aa10.18□□□□□ -0.78
PAX6-268ENST00000640287 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 G0S2P27469 103 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 ZNF664Q8N3J9 261 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 SPANXA1Q9NS26 97 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 RAB5BP61020 215 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 TNP2Q05952 138 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
PAX6-268ENST00000640287 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 AP5S1Q9NUS5 200 aa10.17□□□□□ -0.78
PAX6-268ENST00000640287 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
PAX6-268ENST00000640287 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
PAX6-268ENST00000640287 LINC00614P0C842 121 aa10.16□□□□□ -0.78
PAX6-268ENST00000640287 Q6ZUT4 128 aa10.16□□□□□ -0.78
PAX6-268ENST00000640287 TRAV8-4A0A0B4J246 113 aa10.15□□□□□ -0.78
PAX6-268ENST00000640287 BAGE3Q86Y29 109 aa10.15□□□□□ -0.78
PAX6-268ENST00000640287 FAT2Q9NYQ8 4349 aa10.15□□□□□ -0.79
PAX6-268ENST00000640287 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
PAX6-268ENST00000640287 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
PAX6-268ENST00000640287 EREGO14944 169 aa10.13□□□□□ -0.79
PAX6-268ENST00000640287 PYGO1Q9Y3Y4 419 aa10.13□□□□□ -0.79
PAX6-268ENST00000640287 SS18Q15532 418 aa10.12□□□□□ -0.79
PAX6-268ENST00000640287 Q6ZN92 141 aa10.12□□□□□ -0.79
PAX6-268ENST00000640287 TOMM6Q96B49 74 aa10.12□□□□□ -0.79
PAX6-268ENST00000640287 URB1-AS1Q96HZ7 61 aa10.12□□□□□ -0.79
PAX6-268ENST00000640287 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
PAX6-268ENST00000640287 LINC00959A0A1B0GUT2 108 aa10.11□□□□□ -0.79
PAX6-268ENST00000640287 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
PAX6-268ENST00000640287 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
PAX6-268ENST00000640287 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
PAX6-268ENST00000640287 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
PAX6-268ENST00000640287 SCGB3A1Q96QR1 104 aa10.11□□□□□ -0.79
PAX6-268ENST00000640287 IGLV4-3A0A075B6K6 122 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 A0A087WTM6 91 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 LECT2O14960 151 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 XCL1P47992 114 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 PMCHL1Q16048 86 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
PAX6-268ENST00000640287 GAGE12HA6NDE8 117 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 HBDP02042 147 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 TEX43Q6ZNM6 134 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 MAPKAPK5-AS1Q8N8E1 139 aa10.1□□□□□ -0.79
PAX6-268ENST00000640287 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 CCL25O15444 150 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 C2orf88Q9BSF0 95 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 VCX2Q9H322 139 aa10.09□□□□□ -0.79
PAX6-268ENST00000640287 LRCOL1A6NCL2 159 aa10.08□□□□□ -0.8
PAX6-268ENST00000640287 HSBP1O75506 76 aa10.08□□□□□ -0.8
PAX6-268ENST00000640287 ERASQ7Z444 233 aa10.08□□□□□ -0.8
PAX6-268ENST00000640287 NPSP0C0P6 89 aa10.07□□□□□ -0.8
PAX6-268ENST00000640287 HECTD4Q9Y4D8 3996 aa10.07□□□□□ -0.8
PAX6-268ENST00000640287 SERF1AO75920 110 aa10.06□□□□□ -0.8
PAX6-268ENST00000640287 WFDC2Q14508 124 aa10.06□□□□□ -0.8
PAX6-268ENST00000640287 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
PAX6-268ENST00000640287 A0A096LNJ9 63 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 A0A1B0GVY2 172 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
PAX6-268ENST00000640287 ZC2HC1BQ5TFG8 222 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 Q8N814 137 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 PKD1P98161 4303 aa10.05□□□□□ -0.8
PAX6-268ENST00000640287 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
PAX6-268ENST00000640287 FOXI1Q12951 378 aa10.04□□□□□ -0.8
PAX6-268ENST00000640287 AMELXQ99217 191 aa10.04□□□□□ -0.8
PAX6-268ENST00000640287 EPPK1P58107 5090 aaKnown RBP10.04□□□□□ -0.8
PAX6-268ENST00000640287 C14orf177Q52M58 125 aa10.04□□□□□ -0.8
PAX6-268ENST00000640287 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
PAX6-268ENST00000640287 DNAH11Q96DT5 4516 aa10.03□□□□□ -0.8
PAX6-268ENST00000640287 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.03□□□□□ -0.8
PAX6-268ENST00000640287 ATP5LO75964 103 aa10.03□□□□□ -0.8
PAX6-268ENST00000640287 MALP21145 153 aa10.03□□□□□ -0.8
PAX6-268ENST00000640287 NDUFA6P56556 154 aa10.03□□□□□ -0.8
PAX6-268ENST00000640287 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
PAX6-268ENST00000640287 COX7A2LO14548 114 aa10.02□□□□□ -0.81
PAX6-268ENST00000640287 UBE2D1P51668 147 aa10.02□□□□□ -0.81
PAX6-268ENST00000640287 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.81
PAX6-268ENST00000640287 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms