RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 SULT1A2P50226 295 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 NKX2-5P52952 324 aaPredicted RBP3.43□□□□□ -1.86
PDE4D-229ENST00000638939 RPS20P60866 119 aaKnown RBP3.43□□□□□ -1.86
PDE4D-229ENST00000638939 COX6A2Q02221 97 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 COTL1Q14019 142 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 REG3GQ6UW15 175 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 FAM213BQ8TBF2 198 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 MBD3L1Q8WWY6 194 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 CNFNQ9BYD5 112 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 MANBALQ9NQG1 85 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 NIT2Q9NQR4 276 aa3.43□□□□□ -1.86
PDE4D-229ENST00000638939 A0A096LNI7 61 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 XKRY2A2RUG3 117 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 C19orf71A6NCJ1 209 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 H7C423 109 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 ARPC5O15511 151 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 NCR2O95944 276 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 KRTAP10-8P60410 259 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 MAJINQ3KP22 176 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 CENPWQ5EE01 88 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 TMUB2Q71RG4 321 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 KCNRGQ8N5I3 272 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 STPG4Q8N801 248 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
PDE4D-229ENST00000638939 A0A087WZ39 114 aa3.41□□□□□ -1.86
PDE4D-229ENST00000638939 ZNF25P17030 456 aaPredicted RBP3.41□□□□□ -1.86
PDE4D-229ENST00000638939 RAB5CP51148 216 aa3.41□□□□□ -1.86
PDE4D-229ENST00000638939 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
PDE4D-229ENST00000638939 OR2D3Q8NGH3 330 aa3.41□□□□□ -1.86
PDE4D-229ENST00000638939 GTSF1Q8WW33 167 aa3.41□□□□□ -1.86
PDE4D-229ENST00000638939 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
PDE4D-229ENST00000638939 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 A0A1B0GV50 99 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 APCSP02743 223 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 NTF3P20783 257 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 GNG4P50150 75 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 CCL20P78556 96 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 AMMECR1LQ6DCA0 310 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 LYZL1Q6UWQ5 148 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 Q6ZRP5 223 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 CARD19Q96LW7 228 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 BIN3Q9NQY0 253 aa3.4□□□□□ -1.87
PDE4D-229ENST00000638939 TRBV20OR9-2A0A075B6H5 130 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 KANTRA0A1W2PQU2 76 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 BCL2L11O43521 198 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 PDE6DO43924 150 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 IFNA1P01562 189 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 FGF6P10767 208 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 EIF5AP63241 154 aaKnown RBP3.39□□□□□ -1.87
PDE4D-229ENST00000638939 MEF2BQ02080 365 aaPredicted RBP3.39□□□□□ -1.87
PDE4D-229ENST00000638939 TEX261Q6UWH6 196 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 Q6ZVQ6 151 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 GATD1Q8NB37 220 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 LYPD6BQ8NI32 183 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 FAM210AQ96ND0 272 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 VCX2Q9H322 139 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 GNG13Q9P2W3 67 aa3.39□□□□□ -1.87
PDE4D-229ENST00000638939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
PDE4D-229ENST00000638939 TRAV26-2A0A0B4J265 109 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 IGKV2-29A2NJV5 120 aaPredicted RBP3.38□□□□□ -1.87
PDE4D-229ENST00000638939 SDHAF1A6NFY7 115 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 TEX46H3BTG2 121 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 XCL1P47992 114 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 KIAA1644Q3SXP7 199 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 RNASEKQ6P5S7 137 aaKnown RBP3.38□□□□□ -1.87
PDE4D-229ENST00000638939 MRPL52Q86TS9 123 aaKnown RBP3.38□□□□□ -1.87
PDE4D-229ENST00000638939 BTF3L4Q96K17 158 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 RPP21Q9H633 154 aaKnown RBP3.38□□□□□ -1.87
PDE4D-229ENST00000638939 BATF3Q9NR55 127 aa3.38□□□□□ -1.87
PDE4D-229ENST00000638939 MUC2Q02817 5179 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 LOC107984640A0A0U1RRK4 108 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 RAB19A4D1S5 217 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 SMLR1H3BR10 107 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 I3L3M4 83 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 CCL25O15444 150 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 BCL2P10415 239 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
PDE4D-229ENST00000638939 SYCNQ0VAF6 134 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 RGS21Q2M5E4 152 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 EIF5AL1Q6IS14 154 aaKnown RBP3.37□□□□□ -1.87
PDE4D-229ENST00000638939 SMIM15Q7Z3B0 74 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 ZNF664Q8N3J9 261 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 ISOC2Q96AB3 205 aa3.37□□□□□ -1.87
PDE4D-229ENST00000638939 RPL39LQ96EH5 51 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms