RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 CCL19Q99731 98 aa5.34□□□□□ -1.55
NECAP1-213ENST00000638883 A0A087WWL8 130 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 COX7A2LO14548 114 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 C9orf106Q8NAJ2 232 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 CCL17Q92583 94 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 TIMM17AQ99595 171 aa5.34□□□□□ -1.56
NECAP1-213ENST00000638883 MAST4O15021 2626 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 I3L2K1 104 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 FHL2Q14192 279 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 MIAQ16674 131 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 ZNF876PQ49A33 203 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 TMEM61Q8N0U2 210 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 FAM223BA6NKX1 122 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 RNASE4P34096 147 aaKnown RBP5.33□□□□□ -1.56
NECAP1-213ENST00000638883 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 LINC01561Q8N1V8 128 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 GAFA1Q96PS6 74 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 MALRD1Q5VYJ5 2156 aa5.33□□□□□ -1.56
NECAP1-213ENST00000638883 IGKV3-15P01624 115 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 IGLV2-23P01705 113 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 PSMB8P28062 276 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 C9orf139Q6ZV77 190 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 LY6G5BQ8NDX9 201 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 C11orf21Q9P2W6 132 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 H3BS24 57 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 XCL1P47992 114 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 DCANP1Q8TF63 244 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 C11orf68Q9H3H3 251 aaKnown RBP5.32□□□□□ -1.56
NECAP1-213ENST00000638883 XCL2Q9UBD3 114 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 DKK4Q9UBT3 224 aa5.32□□□□□ -1.56
NECAP1-213ENST00000638883 K7EIM0 57 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 Q6JHZ5 121 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 SEM1Q6ZVN7 128 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 IGHV1-18A0A0C4DH31 117 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 SNURFQ9Y675 71 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 ACANP16112 2415 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 BUB1B-PAK6H3BSN5 160 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 RNASE13Q5GAN3 156 aaKnown RBP5.31□□□□□ -1.56
NECAP1-213ENST00000638883 ZNF843Q8N446 348 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 ZNF580Q9UK33 172 aa5.31□□□□□ -1.56
NECAP1-213ENST00000638883 VSIG2Q96IQ7 327 aa5.3□□□□□ -1.56
NECAP1-213ENST00000638883 IGHV7-4-1A0A0J9YVY3 117 aa5.3□□□□□ -1.56
NECAP1-213ENST00000638883 ADAMTSL4-AS1Q5T5F5 129 aa5.3□□□□□ -1.56
NECAP1-213ENST00000638883 CRPP02741 224 aa5.3□□□□□ -1.56
NECAP1-213ENST00000638883 UBL5Q9BZL1 73 aa5.3□□□□□ -1.56
NECAP1-213ENST00000638883 TSHBP01222 138 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 SOSTDC1Q6X4U4 206 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 MRPL55Q7Z7F7 128 aaKnown RBP5.29□□□□□ -1.56
NECAP1-213ENST00000638883 LINC01600Q96MT4 127 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
NECAP1-213ENST00000638883 FN1P02751 2386 aaKnown RBP5.29□□□□□ -1.56
NECAP1-213ENST00000638883 GNRH2O43555 120 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 ENHOQ6UWT2 76 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 COX8CQ7Z4L0 72 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 LINC00846Q9NV44 126 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 MOB4Q9Y3A3 225 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 TEX22C9J3V5 150 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 HILS1P60008 231 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 A8MZ25 164 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 F8WEM9 126 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 TMEM178BH3BS89 294 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 CDSNQ15517 529 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 OVOL2Q9BRP0 275 aa5.29□□□□□ -1.56
NECAP1-213ENST00000638883 HELZ2Q9BYK8 2649 aaKnown RBP5.28□□□□□ -1.56
NECAP1-213ENST00000638883 IGHV1-3A0A0C4DH29 117 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 IGHV1-58A0A0C4DH39 117 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 IGLV1-44P01699 117 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 TRBV12-3P01733 135 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 MRPS36P82909 103 aaKnown RBP5.28□□□□□ -1.56
NECAP1-213ENST00000638883 AMELXQ99217 191 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 BAHCC1Q9P281 2608 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 A0A0J9YX75 114 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 SNRPD3P62318 126 aaKnown RBP5.28□□□□□ -1.56
NECAP1-213ENST00000638883 HAMPP81172 84 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 SS18Q15532 418 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 SUMO4Q6EEV6 95 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 C6orf226Q5I0X4 101 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 RNASE6Q93091 150 aaKnown RBP5.28□□□□□ -1.56
NECAP1-213ENST00000638883 UPK3BQ9BT76 320 aa5.28□□□□□ -1.56
NECAP1-213ENST00000638883 TRBV7-6A0A0J9YX20 115 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 DAD1P61803 113 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 ECSCRQ19T08 205 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 IGHV4-4A0A075B6R2 117 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 IGHV1-69P01742 117 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 IGHV1-8P0DP01 117 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 PLA2G2AP14555 144 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 HTN1P15515 57 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 Q9H8V8 135 aa5.27□□□□□ -1.57
NECAP1-213ENST00000638883 NCR3O14931 201 aa5.26□□□□□ -1.57
NECAP1-213ENST00000638883 NBR2O15453 112 aa5.26□□□□□ -1.57
NECAP1-213ENST00000638883 LHBP01229 141 aa5.26□□□□□ -1.57
NECAP1-213ENST00000638883 IGHV1-46P01743 117 aa5.26□□□□□ -1.57
NECAP1-213ENST00000638883 TRBV27A0A0K0K1C4 114 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms