RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 LEPROTO15243 131 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 RNASE4P34096 147 aaKnown RBP7.19□□□□□ -1.26
PAX6-242ENST00000638878 APOC4P55056 127 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 SNRPD3P62318 126 aaKnown RBP7.19□□□□□ -1.26
PAX6-242ENST00000638878 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 SYT8Q8NBV8 401 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 PLEKHB2Q96CS7 222 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
PAX6-242ENST00000638878 RYR3Q15413 4870 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 DUSP14O95147 198 aaKnown RBP7.18□□□□□ -1.26
PAX6-242ENST00000638878 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 P0DMU3 169 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 FAM231AP0DMU4 169 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 FAM231CP0DMU5 169 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
PAX6-242ENST00000638878 FAM159AQ6UWV7 190 aa7.18□□□□□ -1.26
PAX6-242ENST00000638878 J3QQQ9 107 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 GNRH2O43555 120 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 TSHBP01222 138 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 CFC1P0CG37 223 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 WWC2-AS2Q96NR7 200 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 WFDC10AQ9H1F0 79 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 MDFICQ9P1T7 246 aa7.17□□□□□ -1.26
PAX6-242ENST00000638878 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 TCL1BO95988 128 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 DEFB131AP59861 70 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 SUMO4Q6EEV6 95 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 Q6ZQT7 251 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 Q6ZUT4 128 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 TRPT1Q86TN4 253 aaKnown RBP7.16□□□□□ -1.26
PAX6-242ENST00000638878 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
PAX6-242ENST00000638878 GEMIN7Q9H840 131 aaKnown RBP7.16□□□□□ -1.26
PAX6-242ENST00000638878 TMEM223A0PJW6 202 aa7.15□□□□□ -1.26
PAX6-242ENST00000638878 TMEM170BQ5T4T1 132 aa7.15□□□□□ -1.26
PAX6-242ENST00000638878 C9orf85Q96MD7 179 aa7.15□□□□□ -1.26
PAX6-242ENST00000638878 EDA2RQ9HAV5 297 aa7.15□□□□□ -1.26
PAX6-242ENST00000638878 ERG28Q9UKR5 140 aa7.15□□□□□ -1.26
PAX6-242ENST00000638878 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
PAX6-242ENST00000638878 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
PAX6-242ENST00000638878 STHQ8IWL8 128 aa7.14□□□□□ -1.27
PAX6-242ENST00000638878 RNF183Q96D59 192 aa7.14□□□□□ -1.27
PAX6-242ENST00000638878 AMELXQ99217 191 aa7.14□□□□□ -1.27
PAX6-242ENST00000638878 H3BMM0 161 aa7.13□□□□□ -1.27
PAX6-242ENST00000638878 ATXN8Q156A1 80 aa7.13□□□□□ -1.27
PAX6-242ENST00000638878 MRPL23Q16540 153 aaKnown RBP7.13□□□□□ -1.27
PAX6-242ENST00000638878 Q6Q795 121 aa7.13□□□□□ -1.27
PAX6-242ENST00000638878 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
PAX6-242ENST00000638878 OVOL2Q9BRP0 275 aa7.13□□□□□ -1.27
PAX6-242ENST00000638878 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
PAX6-242ENST00000638878 IGHV3-16A0A0C4DH30 117 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 TRBV30A0A0K0K1B3 111 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 A8MTW9 85 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 F5H697 171 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 I3L3M4 83 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 M0R2P5 195 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 SPRY2O43597 315 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 SLC25A20O43772 301 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 TIRAPP58753 221 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 C20orf203Q8NBC4 194 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
PAX6-242ENST00000638878 M0QY20 66 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 RHODO00212 210 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
PAX6-242ENST00000638878 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 ANKRD29Q8N6D5 301 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 FAM30AQ9NZY2 134 aa7.11□□□□□ -1.27
PAX6-242ENST00000638878 TRGV11A0A075B6L2 103 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 IGHV1OR15-1A0A075B7D0 117 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 C3orf84H3BNL1 204 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
PAX6-242ENST00000638878 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
PAX6-242ENST00000638878 XGP55808 180 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
PAX6-242ENST00000638878 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 IL17DQ8TAD2 202 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 AGRNO00468 2067 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
PAX6-242ENST00000638878 TRAV26-1A0A087WT03 109 aa7.09□□□□□ -1.27
PAX6-242ENST00000638878 F6UB75 175 aa7.09□□□□□ -1.27
PAX6-242ENST00000638878 RPL35AP18077 110 aaKnown RBP7.09□□□□□ -1.27
PAX6-242ENST00000638878 LINC01620Q4KN68 170 aa7.09□□□□□ -1.27
PAX6-242ENST00000638878 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
PAX6-242ENST00000638878 PTH2Q96A98 100 aa7.09□□□□□ -1.27
PAX6-242ENST00000638878 KNCNA6PVL3 124 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms