RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 BLCAPP62952 87 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 VSIG2Q96IQ7 327 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 NDUFC2O95298 119 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 RNF152Q8N8N0 203 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 C22orf24Q9Y442 160 aa8.9□□□□□ -0.98
GFAP-228ENST00000638488 POLQO75417 2590 aa8.9□□□□□ -0.99
GFAP-228ENST00000638488 F5H697 171 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 SYNJ2BPP57105 145 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 DEFB104AQ8WTQ1 72 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 CENPEQ02224 2701 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 C20orf173Q96LM9 149 aa8.89□□□□□ -0.99
GFAP-228ENST00000638488 NPC2P61916 151 aa8.88□□□□□ -0.99
GFAP-228ENST00000638488 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
GFAP-228ENST00000638488 CSPG4Q6UVK1 2322 aa8.88□□□□□ -0.99
GFAP-228ENST00000638488 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
GFAP-228ENST00000638488 TRAV12-3A0A0B4J271 114 aa8.87□□□□□ -0.99
GFAP-228ENST00000638488 B4DSR2 109 aa8.87□□□□□ -0.99
GFAP-228ENST00000638488 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
GFAP-228ENST00000638488 A0A087WWL8 130 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 TINCRA0A1B0GVN0 87 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 EPM2AB3EWF7 344 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 M0QY20 66 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 DNAL4O96015 105 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 PFN2P35080 140 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 UNQ9165/PRO28630Q6UXU0 137 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 J3QLI3 93 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 PSMB8P28062 276 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 FBN2P35556 2912 aa8.86□□□□□ -0.99
GFAP-228ENST00000638488 NDUFA1O15239 70 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 CD28P10747 220 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 RPL11P62913 178 aaKnown RBP8.85□□□□□ -0.99
GFAP-228ENST00000638488 CIRBPQ14011 172 aaKnown RBP8.85□□□□□ -0.99
GFAP-228ENST00000638488 LRRK2Q5S007 2527 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 ANKRD17O75179 2603 aaKnown RBP8.85□□□□□ -0.99
GFAP-228ENST00000638488 A6NDX4 124 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 FAM223BA6NKX1 122 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 FAM223AQ8IWN6 122 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
GFAP-228ENST00000638488 PRIMA1Q86XR5 153 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 SOCS3O14543 225 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 IGHG2P01859 326 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 C19orf54Q5BKX5 351 aa8.84□□□□□ -0.99
GFAP-228ENST00000638488 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
GFAP-228ENST00000638488 IGHV4-59P01825 116 aa8.84□□□□□ -1
GFAP-228ENST00000638488 ZNF843Q8N446 348 aa8.84□□□□□ -1
GFAP-228ENST00000638488 KRTAP10-9P60411 292 aa8.83□□□□□ -1
GFAP-228ENST00000638488 FHL2Q14192 279 aa8.83□□□□□ -1
GFAP-228ENST00000638488 DEFB112Q30KQ8 113 aa8.83□□□□□ -1
GFAP-228ENST00000638488 FAM104AQ969W3 186 aa8.83□□□□□ -1
GFAP-228ENST00000638488 OVOL2Q9BRP0 275 aa8.83□□□□□ -1
GFAP-228ENST00000638488 DEFB1P60022 68 aa8.83□□□□□ -1
GFAP-228ENST00000638488 ZANQ9Y493 2812 aa8.82□□□□□ -1
GFAP-228ENST00000638488 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
GFAP-228ENST00000638488 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
GFAP-228ENST00000638488 KLLNB2CW77 178 aa8.82□□□□□ -1
GFAP-228ENST00000638488 Q8N2B8 174 aa8.82□□□□□ -1
GFAP-228ENST00000638488 C9orf85Q96MD7 179 aa8.82□□□□□ -1
GFAP-228ENST00000638488 SERP1Q9Y6X1 66 aa8.82□□□□□ -1
GFAP-228ENST00000638488 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
GFAP-228ENST00000638488 LINC01356Q8N9X3 169 aa8.82□□□□□ -1
GFAP-228ENST00000638488 UBE2D4Q9Y2X8 147 aa8.82□□□□□ -1
GFAP-228ENST00000638488 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
GFAP-228ENST00000638488 FAM236CP0DP71 79 aa8.81□□□□□ -1
GFAP-228ENST00000638488 C10orf99Q6UWK7 81 aa8.81□□□□□ -1
GFAP-228ENST00000638488 LINC00336Q6ZUF6 198 aa8.81□□□□□ -1
GFAP-228ENST00000638488 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
GFAP-228ENST00000638488 DSCR9P59020 149 aa8.81□□□□□ -1
GFAP-228ENST00000638488 FAM218AQ96MZ4 157 aa8.81□□□□□ -1
GFAP-228ENST00000638488 EPG5Q9HCE0 2579 aa8.8□□□□□ -1
GFAP-228ENST00000638488 A0A087WVE0 104 aa8.8□□□□□ -1
GFAP-228ENST00000638488 EDN2P20800 178 aa8.8□□□□□ -1
GFAP-228ENST00000638488 ABCA12Q86UK0 2595 aa8.8□□□□□ -1
GFAP-228ENST00000638488 A8MZ25 164 aa8.8□□□□□ -1
GFAP-228ENST00000638488 C1orf43Q9BWL3 253 aa8.8□□□□□ -1
GFAP-228ENST00000638488 LINC00846Q9NV44 126 aa8.8□□□□□ -1
GFAP-228ENST00000638488 NDUFA4O00483 81 aa8.79□□□□□ -1
GFAP-228ENST00000638488 USMG5Q96IX5 58 aa8.79□□□□□ -1
GFAP-228ENST00000638488 TMEM243Q9BU79 118 aa8.79□□□□□ -1
GFAP-228ENST00000638488 PTPN13Q12923 2485 aa8.79□□□□□ -1
GFAP-228ENST00000638488 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
GFAP-228ENST00000638488 F6UB75 175 aa8.78□□□□□ -1
GFAP-228ENST00000638488 PF4P02776 101 aa8.78□□□□□ -1
GFAP-228ENST00000638488 ATP5EP2Q5VTU8 51 aa8.78□□□□□ -1
GFAP-228ENST00000638488 DOPEY2Q9Y3R5 2298 aa8.78□□□□□ -1
GFAP-228ENST00000638488 IGHV3-16A0A0C4DH30 117 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RS1O15537 224 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RPL28P46779 137 aaKnown RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 HIST2H2BCQ6DN03 193 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 TMEM86BQ8N661 226 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RBMY1BA6NDE4 496 aaKnown RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 RBMY1EA6NEQ0 496 aaKnown RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
GFAP-228ENST00000638488 RBMY1DP0C7P1 496 aaKnown RBP8.77□□□□□ -1.01
GFAP-228ENST00000638488 RBMY1A1P0DJD3 496 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms