RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 RMI2Q96E14 147 aa15□□□□□ -0.01
CHRNA7-231ENST00000637786 Q9HAA7 133 aa15□□□□□ -0.01
CHRNA7-231ENST00000637786 CDC42SE2Q9NRR3 84 aa15□□□□□ -0.01
CHRNA7-231ENST00000637786 PYGO1Q9Y3Y4 419 aa15□□□□□ -0.01
CHRNA7-231ENST00000637786 COX11Q9Y6N1 276 aa14.99□□□□□ -0.01
CHRNA7-231ENST00000637786 DNAH2Q9P225 4427 aa14.98□□□□□ -0.01
CHRNA7-231ENST00000637786 ZNF664Q8N3J9 261 aa14.98□□□□□ -0.01
CHRNA7-231ENST00000637786 URB1-AS1Q96HZ7 61 aa14.98□□□□□ -0.01
CHRNA7-231ENST00000637786 TM2D2Q9BX73 214 aa14.98□□□□□ -0.01
CHRNA7-231ENST00000637786 FRAS1Q86XX4 4008 aa14.98□□□□□ -0.01
CHRNA7-231ENST00000637786 MRPS36P82909 103 aaKnown RBP14.97□□□□□ -0.01
CHRNA7-231ENST00000637786 LINC00336Q6ZUF6 198 aa14.97□□□□□ -0.01
CHRNA7-231ENST00000637786 TRAV8-4A0A0B4J246 113 aa14.96□□□□□ -0.01
CHRNA7-231ENST00000637786 NPSP0C0P6 89 aa14.96□□□□□ -0.01
CHRNA7-231ENST00000637786 CLPSL2Q6UWE3 100 aa14.96□□□□□ -0.01
CHRNA7-231ENST00000637786 TOMM6Q96B49 74 aa14.96□□□□□ -0.01
CHRNA7-231ENST00000637786 CHCHD1Q96BP2 118 aaKnown RBP14.96□□□□□ -0.01
CHRNA7-231ENST00000637786 DNAH10Q8IVF4 4471 aa14.96□□□□□ -0.02
CHRNA7-231ENST00000637786 C1orf43Q9BWL3 253 aa14.95□□□□□ -0.02
CHRNA7-231ENST00000637786 Q6ZUT4 128 aa14.93□□□□□ -0.02
CHRNA7-231ENST00000637786 BAGE3Q86Y29 109 aa14.93□□□□□ -0.02
CHRNA7-231ENST00000637786 FAM104AQ969W3 186 aa14.93□□□□□ -0.02
CHRNA7-231ENST00000637786 IGKV2D-24A0A075B6R9 120 aa14.92□□□□□ -0.02
CHRNA7-231ENST00000637786 IGIPA6NJ69 53 aa14.92□□□□□ -0.02
CHRNA7-231ENST00000637786 TIMM17AQ99595 171 aa14.92□□□□□ -0.02
CHRNA7-231ENST00000637786 IGLV4-3A0A075B6K6 122 aa14.91□□□□□ -0.02
CHRNA7-231ENST00000637786 PSCAO43653 123 aa14.91□□□□□ -0.02
CHRNA7-231ENST00000637786 ERASQ7Z444 233 aa14.91□□□□□ -0.02
CHRNA7-231ENST00000637786 DNAH17Q9UFH2 4485 aa14.91□□□□□ -0.02
CHRNA7-231ENST00000637786 CCL25O15444 150 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BKO60814 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HBDP02042 147 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BJP06899 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BOP23527 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BBP33778 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BDP58876 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BCP62807 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST2H2BEQ16778 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BHQ93079 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 TMEM141Q96I45 108 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BNQ99877 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 HIST1H2BMQ99879 126 aa14.9□□□□□ -0.02
CHRNA7-231ENST00000637786 A0A096LNJ9 63 aa14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 IGKV3OR2-268A0A0C4DH90 116 aa14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 LINC00959A0A1B0GUT2 108 aa14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 PAPPA-AS1Q5QFB9 102 aa14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 SCGB3A1Q96QR1 104 aa14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 OPRPNQ99935 248 aaPredicted RBP14.89□□□□□ -0.03
CHRNA7-231ENST00000637786 PRSS29PA6NIE9 313 aa14.88□□□□□ -0.03
CHRNA7-231ENST00000637786 RNASE13Q5GAN3 156 aaKnown RBP14.88□□□□□ -0.03
CHRNA7-231ENST00000637786 KRTAP26-1Q6PEX3 210 aa14.88□□□□□ -0.03
CHRNA7-231ENST00000637786 Q6ZN92 141 aa14.88□□□□□ -0.03
CHRNA7-231ENST00000637786 IGLV10-54A0A075B6I4 117 aa14.87□□□□□ -0.03
CHRNA7-231ENST00000637786 C1orf196B1AJZ1 125 aa14.87□□□□□ -0.03
CHRNA7-231ENST00000637786 TNP2Q05952 138 aa14.87□□□□□ -0.03
CHRNA7-231ENST00000637786 SS18Q15532 418 aa14.87□□□□□ -0.03
CHRNA7-231ENST00000637786 HSBP1O75506 76 aa14.86□□□□□ -0.03
CHRNA7-231ENST00000637786 SERF1AO75920 110 aa14.86□□□□□ -0.03
CHRNA7-231ENST00000637786 TEX43Q6ZNM6 134 aa14.86□□□□□ -0.03
CHRNA7-231ENST00000637786 LINC00310P59036 64 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 PMCHL1Q16048 86 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 PDZD11Q5EBL8 140 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 MAPKAPK5-AS1Q8N8E1 139 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 CHCHD10Q8WYQ3 142 aaPredicted RBP14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 AMELXQ99217 191 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 VCX2Q9H322 139 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 FAT2Q9NYQ8 4349 aa14.85□□□□□ -0.03
CHRNA7-231ENST00000637786 IFITM10A6NMD0 228 aa14.84□□□□□ -0.03
CHRNA7-231ENST00000637786 TRAV13-1A0A0B4J241 112 aa14.83□□□□□ -0.04
CHRNA7-231ENST00000637786 LRCOL1A6NCL2 159 aa14.83□□□□□ -0.04
CHRNA7-231ENST00000637786 LINC00173Q6ZV60 143 aa14.83□□□□□ -0.04
CHRNA7-231ENST00000637786 C2orf88Q9BSF0 95 aa14.83□□□□□ -0.04
CHRNA7-231ENST00000637786 A0A087WTM6 91 aa14.82□□□□□ -0.04
CHRNA7-231ENST00000637786 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.82□□□□□ -0.04
CHRNA7-231ENST00000637786 GAGE12HA6NDE8 117 aa14.81□□□□□ -0.04
CHRNA7-231ENST00000637786 ATP5LO75964 103 aa14.81□□□□□ -0.04
CHRNA7-231ENST00000637786 CD164L2Q6UWJ8 174 aa14.81□□□□□ -0.04
CHRNA7-231ENST00000637786 EREGO14944 169 aa14.8□□□□□ -0.04
CHRNA7-231ENST00000637786 XCL1P47992 114 aa14.8□□□□□ -0.04
CHRNA7-231ENST00000637786 FOXI1Q12951 378 aa14.79□□□□□ -0.04
CHRNA7-231ENST00000637786 COA6Q5JTJ3 125 aaKnown RBP14.79□□□□□ -0.04
CHRNA7-231ENST00000637786 BAALCQ8WXS3 180 aa14.79□□□□□ -0.04
CHRNA7-231ENST00000637786 NUPR1O60356 82 aa14.78□□□□□ -0.04
CHRNA7-231ENST00000637786 UBE2D1P51668 147 aa14.78□□□□□ -0.04
CHRNA7-231ENST00000637786 FAM19A2Q8N3H0 131 aa14.78□□□□□ -0.04
CHRNA7-231ENST00000637786 A0A1B0GVY2 172 aa14.77□□□□□ -0.05
CHRNA7-231ENST00000637786 ZC2HC1BQ5TFG8 222 aa14.77□□□□□ -0.05
CHRNA7-231ENST00000637786 FAM19A3Q7Z5A8 133 aa14.77□□□□□ -0.05
CHRNA7-231ENST00000637786 PMVKQ15126 192 aa14.76□□□□□ -0.05
CHRNA7-231ENST00000637786 C14orf177Q52M58 125 aa14.76□□□□□ -0.05
CHRNA7-231ENST00000637786 CST9LQ9H4G1 147 aa14.76□□□□□ -0.05
CHRNA7-231ENST00000637786 SEC11AP67812 179 aa14.75□□□□□ -0.05
CHRNA7-231ENST00000637786 WFDC2Q14508 124 aa14.75□□□□□ -0.05
CHRNA7-231ENST00000637786 LINC00242Q5T6M2 205 aa14.75□□□□□ -0.05
CHRNA7-231ENST00000637786 USP17L23D6RBM5 183 aa14.74□□□□□ -0.05
CHRNA7-231ENST00000637786 Q8N814 137 aa14.74□□□□□ -0.05
CHRNA7-231ENST00000637786 IGHV3OR16-9A0A0B4J2B5 98 aa14.73□□□□□ -0.05
CHRNA7-231ENST00000637786 NDUFA6P56556 154 aa14.73□□□□□ -0.05
CHRNA7-231ENST00000637786 CFAP161Q6P656 301 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms