RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 UCNP55089 124 aa14.6□□□□□ -0.07
CACNA1A-243ENST00000637616 USP9XQ93008 2570 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-243ENST00000637616 LINC01587Q99440 93 aa14.59□□□□□ -0.07
CACNA1A-243ENST00000637616 SOSTDC1Q6X4U4 206 aa14.58□□□□□ -0.07
CACNA1A-243ENST00000637616 IGHV3OR16-12A0A075B7B8 117 aa14.58□□□□□ -0.08
CACNA1A-243ENST00000637616 TRAV13-1A0A0B4J241 112 aa14.58□□□□□ -0.08
CACNA1A-243ENST00000637616 LINC00694P0DN24 101 aa14.57□□□□□ -0.08
CACNA1A-243ENST00000637616 NDUFA1O15239 70 aa14.57□□□□□ -0.08
CACNA1A-243ENST00000637616 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
CACNA1A-243ENST00000637616 CIRBPQ14011 172 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-243ENST00000637616 CFAP46Q8IYW2 2715 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 SMCR5Q8TEV8 140 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 HERV-K104P63124 156 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 EDA2RQ9HAV5 297 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 FAM236AA0A1B0GUQ0 79 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 FAM236BA0A1B0GV22 79 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 ZNF415Q09FC8 603 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 DEFB121Q5J5C9 76 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 LINC00242Q5T6M2 205 aa14.55□□□□□ -0.08
CACNA1A-243ENST00000637616 WNK1Q9H4A3 2382 aa14.53□□□□□ -0.08
CACNA1A-243ENST00000637616 IGHV3-53P01767 116 aa14.53□□□□□ -0.08
CACNA1A-243ENST00000637616 PIK3CD-AS1Q5SR53 167 aa14.53□□□□□ -0.08
CACNA1A-243ENST00000637616 TIMM17BO60830 172 aa14.53□□□□□ -0.08
CACNA1A-243ENST00000637616 FAM240AA0A1B0GVK7 77 aa14.52□□□□□ -0.08
CACNA1A-243ENST00000637616 B4DSR2 109 aa14.52□□□□□ -0.08
CACNA1A-243ENST00000637616 DAZ2Q13117 558 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-243ENST00000637616 DAZ4Q86SG3 579 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-243ENST00000637616 DAZ3Q9NR90 486 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-243ENST00000637616 FBN2P35556 2912 aa14.52□□□□□ -0.09
CACNA1A-243ENST00000637616 COX7A2LO14548 114 aa14.52□□□□□ -0.09
CACNA1A-243ENST00000637616 PRIMA1Q86XR5 153 aa14.52□□□□□ -0.09
CACNA1A-243ENST00000637616 C11orf72Q8NBR9 251 aa14.52□□□□□ -0.09
CACNA1A-243ENST00000637616 AKAP9Q99996 3911 aa14.51□□□□□ -0.09
CACNA1A-243ENST00000637616 FAM218AQ96MZ4 157 aa14.51□□□□□ -0.09
CACNA1A-243ENST00000637616 XCL2Q9UBD3 114 aa14.51□□□□□ -0.09
CACNA1A-243ENST00000637616 TIRAPP58753 221 aa14.51□□□□□ -0.09
CACNA1A-243ENST00000637616 CHD6Q8TD26 2715 aa14.51□□□□□ -0.09
CACNA1A-243ENST00000637616 Q9HAA7 133 aa14.5□□□□□ -0.09
CACNA1A-243ENST00000637616 TMEM89A2RUT3 159 aa14.5□□□□□ -0.09
CACNA1A-243ENST00000637616 MRPL23Q16540 153 aaKnown RBP14.5□□□□□ -0.09
CACNA1A-243ENST00000637616 UBE2E2Q96LR5 201 aa14.5□□□□□ -0.09
CACNA1A-243ENST00000637616 RNF152Q8N8N0 203 aa14.5□□□□□ -0.09
CACNA1A-243ENST00000637616 IGLV5-45A0A087WSX0 123 aa14.49□□□□□ -0.09
CACNA1A-243ENST00000637616 SMIM1B2RUZ4 78 aa14.49□□□□□ -0.09
CACNA1A-243ENST00000637616 TRBV7-7A0A0K0K1E9 115 aa14.49□□□□□ -0.09
CACNA1A-243ENST00000637616 BAALC-AS2P0C853 105 aa14.49□□□□□ -0.09
CACNA1A-243ENST00000637616 KHDC1LQ5JSQ8 128 aa14.49□□□□□ -0.09
CACNA1A-243ENST00000637616 NIPBLQ6KC79 2804 aaeCLIP14.48□□□□□ -0.09
CACNA1A-243ENST00000637616 IGLV5-39A0A0G2JS06 123 aa14.47□□□□□ -0.09
CACNA1A-243ENST00000637616 HERVK_113P63121 156 aa14.47□□□□□ -0.09
CACNA1A-243ENST00000637616 TLN2Q9Y4G6 2542 aa14.47□□□□□ -0.09
CACNA1A-243ENST00000637616 SETD2Q9BYW2 2564 aaPredicted RBP14.46□□□□□ -0.09
CACNA1A-243ENST00000637616 TRGV1A0A0A0MS02 117 aa14.46□□□□□ -0.09
CACNA1A-243ENST00000637616 MAP6D1Q9H9H5 199 aa14.46□□□□□ -0.09
CACNA1A-243ENST00000637616 JMJD1CQ15652 2540 aa14.46□□□□□ -0.1
CACNA1A-243ENST00000637616 NTM-AS1Q6ZSK4 140 aa14.45□□□□□ -0.1
CACNA1A-243ENST00000637616 ZNF702PQ9H963 129 aa14.45□□□□□ -0.1
CACNA1A-243ENST00000637616 C22orf24Q9Y442 160 aa14.45□□□□□ -0.1
CACNA1A-243ENST00000637616 MYO18BQ8IUG5 2567 aa14.45□□□□□ -0.1
CACNA1A-243ENST00000637616 ANKRD17O75179 2603 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-243ENST00000637616 DNAJC30Q96LL9 226 aa14.44□□□□□ -0.1
CACNA1A-243ENST00000637616 IGKV3OR2-268A0A0C4DH90 116 aa14.44□□□□□ -0.1
CACNA1A-243ENST00000637616 RS1O15537 224 aa14.44□□□□□ -0.1
CACNA1A-243ENST00000637616 BEAN1Q3B7T3 259 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 Q96MF0 132 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 GAGE2AQ6NT46 116 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 TEX15Q9BXT5 2789 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 PKD1L2Q7Z442 2459 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 FAM110AQ9BQ89 295 aa14.43□□□□□ -0.1
CACNA1A-243ENST00000637616 EPG5Q9HCE0 2579 aa14.42□□□□□ -0.1
CACNA1A-243ENST00000637616 VPREB3Q9UKI3 123 aa14.41□□□□□ -0.1
CACNA1A-243ENST00000637616 INSP01308 110 aa14.41□□□□□ -0.1
CACNA1A-243ENST00000637616 DYNLRB2Q8TF09 96 aa14.41□□□□□ -0.1
CACNA1A-243ENST00000637616 DOPEY1Q5JWR5 2465 aa14.41□□□□□ -0.1
CACNA1A-243ENST00000637616 Q6ZTI0 123 aa14.4□□□□□ -0.1
CACNA1A-243ENST00000637616 TOMM7Q9P0U1 55 aa14.4□□□□□ -0.1
CACNA1A-243ENST00000637616 FAM208BQ5VWN6 2430 aa14.4□□□□□ -0.1
CACNA1A-243ENST00000637616 ACACBO00763 2458 aa14.4□□□□□ -0.1
CACNA1A-243ENST00000637616 NBPF19A0A087WUL8 3843 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 F5H768 121 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 ACYP1P07311 99 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 NF1P21359 2839 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 A8MTW9 85 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 C9orf129Q5T035 196 aaKnown RBP14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 PTPN13Q12923 2485 aa14.39□□□□□ -0.11
CACNA1A-243ENST00000637616 LINC00643Q86TS7 51 aa14.38□□□□□ -0.11
CACNA1A-243ENST00000637616 CACNA1AO00555 2505 aa14.38□□□□□ -0.11
CACNA1A-243ENST00000637616 CDC42SE2Q9NRR3 84 aa14.38□□□□□ -0.11
CACNA1A-243ENST00000637616 SONP18583 2426 aaKnown RBP14.38□□□□□ -0.11
CACNA1A-243ENST00000637616 LINC00337Q8N6G1 96 aa14.37□□□□□ -0.11
CACNA1A-243ENST00000637616 C11orf44Q8N8P7 122 aa14.37□□□□□ -0.11
CACNA1A-243ENST00000637616 LINC01356Q8N9X3 169 aa14.37□□□□□ -0.11
CACNA1A-243ENST00000637616 TRACP01848 142 aa14.37□□□□□ -0.11
CACNA1A-243ENST00000637616 KLK5Q9Y337 293 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-243ENST00000637616 RPL36AP83881 106 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-243ENST00000637616 C9orf153Q5TBE3 101 aa14.36□□□□□ -0.11
CACNA1A-243ENST00000637616 C1orf158Q8N1D5 194 aa14.36□□□□□ -0.11
CACNA1A-243ENST00000637616 MIR7-3HGQ8N6C7 128 aa14.36□□□□□ -0.11
CACNA1A-243ENST00000637616 RPL36ALQ969Q0 106 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-243ENST00000637616 ABCA12Q86UK0 2595 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms