RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	ATG12	O94817	140 aa		-3.58	□□□□□ -2.98
TCF4-287	ENST00000637500	NDUFA4L2	Q9NRX3	87 aa		-3.58	□□□□□ -2.98
TCF4-287	ENST00000637500	MARF1	Q9Y4F3	1742 aa	Known RBP	-3.58	□□□□□ -2.98
TCF4-287	ENST00000637500	MAP3K1	Q13233	1512 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	ARPC5	O15511	151 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	ALX1	Q15699	326 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	GINS3	Q9BRX5	216 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	STOML2	Q9UJZ1	356 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	ATP6V1D	Q9Y5K8	247 aa		-3.59	□□□□□ -2.98
TCF4-287	ENST00000637500	COL14A1	Q05707	1796 aa	Known RBP	-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	IFNA17	P01571	189 aa		-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	CCL7	P80098	99 aa		-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500		Q8N8P6	123 aa		-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	ZCCHC11	Q5TAX3	1644 aa	Known RBP	-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	BPTF	Q12830	3046 aa		-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	SHANK2	Q9UPX8	1470 aa		-3.6	□□□□□ -2.99
TCF4-287	ENST00000637500	RAPGEF6	Q8TEU7	1601 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	MYH3	P11055	1940 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	BORCS7-ASMT	A0A0B4J1R7	106 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	SMIM23	A6NLE4	172 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	HSD11B1	P28845	292 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	TMED4	Q7Z7H5	227 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	LAMTOR2	Q9Y2Q5	125 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	KNDC1	Q76NI1	1749 aa		-3.61	□□□□□ -2.99
TCF4-287	ENST00000637500	LELP1	Q5T871	98 aa		-3.62	□□□□□ -2.99
TCF4-287	ENST00000637500	DISP2	A7MBM2	1401 aa		-3.62	□□□□□ -2.99
TCF4-287	ENST00000637500	NWD2	Q9ULI1	1742 aa		-3.63	□□□□□ -2.99
TCF4-287	ENST00000637500	SPA17	Q15506	151 aa		-3.63	□□□□□ -2.99
TCF4-287	ENST00000637500	MED31	Q9Y3C7	131 aa		-3.63	□□□□□ -2.99
TCF4-287	ENST00000637500		S4R3F8	94 aa		-3.63	□□□□□ -2.99
TCF4-287	ENST00000637500		V9GYH0	126 aa		-3.63	□□□□□ -2.99
TCF4-287	ENST00000637500	RIMS1	Q86UR5	1692 aa	Known RBP	-3.64	□□□□□ -2.99
TCF4-287	ENST00000637500	ERCC6	Q03468	1493 aa		-3.64	□□□□□ -2.99
TCF4-287	ENST00000637500	SPANXN1	Q5VSR9	72 aa		-3.64	□□□□□ -2.99
TCF4-287	ENST00000637500	CRIPT	Q9P021	101 aa		-3.64	□□□□□ -2.99
TCF4-287	ENST00000637500	ADCY9	O60503	1353 aa		-3.64	□□□□□ -2.99
TCF4-287	ENST00000637500	UQCR11	O14957	56 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	RBP4	P02753	201 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	RPL7	P18124	248 aa	Known RBP	-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	UBE2G1	P62253	170 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	PSPH	P78330	225 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	DCUN1D2	Q6PH85	259 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	ATP6V1G3	Q96LB4	118 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	DNAH10	Q8IVF4	4471 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	ITPR2	Q14571	2701 aa		-3.65	□□□□□ -2.99
TCF4-287	ENST00000637500	E2F6	O75461	281 aa		-3.66	□□□□□ -3
TCF4-287	ENST00000637500	DEFB110	Q30KQ9	67 aa		-3.66	□□□□□ -3
TCF4-287	ENST00000637500	BAGE2	Q86Y30	109 aa		-3.66	□□□□□ -3
TCF4-287	ENST00000637500	LENEP	Q9Y5L5	61 aa		-3.66	□□□□□ -3
TCF4-287	ENST00000637500	DAPK1	P53355	1430 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	YPEL1	O60688	119 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	CEBPG	P53567	150 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	CCL8	P80075	99 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	WFDC13	Q8IUB5	93 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	OR13C6P	Q8NH95	151 aa		-3.67	□□□□□ -3
TCF4-287	ENST00000637500	LLPH	Q9BRT6	129 aa	Known RBP	-3.67	□□□□□ -3
TCF4-287	ENST00000637500	MT1E	P04732	61 aa		-3.68	□□□□□ -3
TCF4-287	ENST00000637500	C10orf113	Q5VZT2	155 aa		-3.68	□□□□□ -3
TCF4-287	ENST00000637500	RPL7L1	Q6DKI1	246 aa	Known RBP	-3.68	□□□□□ -3
TCF4-287	ENST00000637500	SPTSSB	Q8NFR3	76 aa		-3.68	□□□□□ -3
TCF4-287	ENST00000637500	CDC42SE2	Q9NRR3	84 aa		-3.68	□□□□□ -3
TCF4-287	ENST00000637500	LSM2	Q9Y333	95 aa	Known RBP	-3.68	□□□□□ -3
TCF4-287	ENST00000637500	DMXL2	Q8TDJ6	3036 aa		-3.68	□□□□□ -3
TCF4-287	ENST00000637500		A0A0G2JMZ2	1700 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	TRBV7-3	A0A075B6L6	115 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500		E7EQ34	232 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	APOC3	P02656	99 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	HLA-DRB4	P13762	266 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	TPPP2	P59282	170 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	CLLU1	Q5K131	121 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	FAM24B	Q8N5W8	94 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	TMEM263	Q8WUH6	116 aa	Known RBP	-3.69	□□□□□ -3
TCF4-287	ENST00000637500	DYDC1	Q8WWB3	177 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	ARL2BP	Q9Y2Y0	163 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	HLA-DRB4	X5D2U9	266 aa		-3.69	□□□□□ -3
TCF4-287	ENST00000637500	IFNA1	P01562	189 aa		-3.7	□□□□□ -3
TCF4-287	ENST00000637500	DHRS4L2	Q6PKH6	230 aa		-3.7	□□□□□ -3
TCF4-287	ENST00000637500	SCIMP	Q6UWF3	145 aa		-3.7	□□□□□ -3
TCF4-287	ENST00000637500	TRAPPC2L	Q9UL33	140 aa		-3.7	□□□□□ -3
TCF4-287	ENST00000637500	BTAF1	O14981	1849 aa		-3.7	□□□□□ -3
TCF4-287	ENST00000637500	BCOR	Q6W2J9	1755 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	PLB1	Q6P1J6	1458 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	SPAAR	A0A1B0GVQ0	90 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500		A6NIN4	97 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	POLR2H	P52434	150 aa	Known RBP	-3.71	□□□□□ -3
TCF4-287	ENST00000637500	BTG2	P78543	158 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	MRPL40	Q9NQ50	206 aa	Known RBP	-3.71	□□□□□ -3
TCF4-287	ENST00000637500	LINC01558	Q9Y6Z2	57 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	QRICH2	Q9H0J4	1663 aa		-3.71	□□□□□ -3
TCF4-287	ENST00000637500	SPTBN5	Q9NRC6	3674 aa	Known RBP	-3.72	□□□□□ -3
TCF4-287	ENST00000637500	CCDC141	Q6ZP82	1450 aa		-3.72	□□□□□ -3
TCF4-287	ENST00000637500	S100A5	P33763	92 aa		-3.72	□□□□□ -3
TCF4-287	ENST00000637500	GNG3	P63215	75 aa		-3.72	□□□□□ -3
TCF4-287	ENST00000637500	LINC01600	Q96MT4	127 aa		-3.72	□□□□□ -3
TCF4-287	ENST00000637500	SELENOS	Q9BQE4	189 aa		-3.72	□□□□□ -3
TCF4-287	ENST00000637500	NCOA3	Q9Y6Q9	1424 aa		-3.72	□□□□□ -3.01
TCF4-287	ENST00000637500	ARHGEF10	O15013	1369 aa		-3.73	□□□□□ -3.01
TCF4-287	ENST00000637500		I3L3M4	83 aa		-3.73	□□□□□ -3.01
TCF4-287	ENST00000637500	NIPSNAP2	O75323	286 aa		-3.73	□□□□□ -3.01
TCF4-287	ENST00000637500	SIX6	O95475	246 aa		-3.73	□□□□□ -3.01

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms