RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 LINC01560Q8TB33 94 aa5.6□□□□□ -1.51
SCN8A-212ENST00000636945 GCN1Q92616 2671 aaKnown RBP5.59□□□□□ -1.51
SCN8A-212ENST00000636945 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 PF4P02776 101 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 MALP21145 153 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
SCN8A-212ENST00000636945 LINC01561Q8N1V8 128 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 HIVEP3Q5T1R4 2406 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 A8MTW9 85 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 KIR2DL5BQ8NHK3 375 aa5.59□□□□□ -1.51
SCN8A-212ENST00000636945 LRRK2Q5S007 2527 aa5.59□□□□□ -1.52
SCN8A-212ENST00000636945 CFHR3Q02985 330 aa5.59□□□□□ -1.52
SCN8A-212ENST00000636945 EDN2P20800 178 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
SCN8A-212ENST00000636945 HIST2H2BCQ6DN03 193 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 HIST2H2BDQ6DRA6 164 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 COX6A2Q02221 97 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 PRIMA1Q86XR5 153 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 LINC00467Q9BRT7 94 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 DOPEY2Q9Y3R5 2298 aa5.58□□□□□ -1.52
SCN8A-212ENST00000636945 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 C9orf129Q5T035 196 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 Q9UF83 564 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 SPTBN1Q01082 2364 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 SPTAN1Q13813 2472 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 IGHV3OR16-12A0A075B7B8 117 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 NDUFC2-KCTD14E9PQ53 114 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 F5H768 121 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 K7EQG2 157 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 RBMY1A1P0DJD3 496 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 RBMY1CP0DJD4 496 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 GRNP28799 593 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 PROK1P58294 105 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 RBMY1FQ15415 496 aaKnown RBP5.57□□□□□ -1.52
SCN8A-212ENST00000636945 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 Q9H8V8 135 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 TRAV12-2A0A075B6T6 113 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 ADORA2A-AS1P86434 159 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 Q6ZSN1 163 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 ABCA4P78363 2273 aa5.57□□□□□ -1.52
SCN8A-212ENST00000636945 UBR5O95071 2799 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-212ENST00000636945 USP9XQ93008 2570 aaPredicted RBP5.56□□□□□ -1.52
SCN8A-212ENST00000636945 LMO4P61968 165 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 OVOL2Q9BRP0 275 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 LINC00846Q9NV44 126 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 FLNBO75369 2602 aaKnown RBP5.56□□□□□ -1.52
SCN8A-212ENST00000636945 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 PCNX1Q96RV3 2341 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 NACAE9PAV3 2078 aa5.56□□□□□ -1.52
SCN8A-212ENST00000636945 DOPEY1Q5JWR5 2465 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 FLNCQ14315 2725 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.55□□□□□ -1.52
SCN8A-212ENST00000636945 IGKV2-29A2NJV5 120 aaPredicted RBP5.55□□□□□ -1.52
SCN8A-212ENST00000636945 WNK2Q9Y3S1 2297 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
SCN8A-212ENST00000636945 LRBAP50851 2863 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 IGKV2-28A0A075B6P5 120 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 IGKV2D-28P01615 120 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 TRAV13-2A0A0B4J235 113 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 IGHV3-53P01767 116 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 SS18Q15532 418 aa5.55□□□□□ -1.52
SCN8A-212ENST00000636945 USP9YO00507 2555 aaPredicted RBP5.54□□□□□ -1.52
SCN8A-212ENST00000636945 IGKV3-7A0A075B6H7 116 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 SPINK13Q1W4C9 94 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 UBTD1Q9HAC8 227 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 HECTD1Q9ULT8 2610 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 PTPN13Q12923 2485 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 IGHV3-11P01762 117 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 DSCR8Q96T75 97 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 PIMREGQ9BSJ6 248 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 Q9HAA7 133 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 TENM4Q6N022 2769 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 ZFHX3Q15911 3703 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 A6NDX4 124 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 MRAPQ8TCY5 172 aa5.54□□□□□ -1.52
SCN8A-212ENST00000636945 A0A087WYN8 130 aa5.53□□□□□ -1.52
SCN8A-212ENST00000636945 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
SCN8A-212ENST00000636945 FHL2Q14192 279 aa5.53□□□□□ -1.52
SCN8A-212ENST00000636945 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
SCN8A-212ENST00000636945 NDUFC2O95298 119 aa5.53□□□□□ -1.52
SCN8A-212ENST00000636945 DNAL4O96015 105 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 SNRPD3P62318 126 aaKnown RBP5.52□□□□□ -1.53
SCN8A-212ENST00000636945 CDSNQ15517 529 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 A0A087WVE0 104 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 H0YGX0 51 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 C11orf72Q8NBR9 251 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 PSMB8P28062 276 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 ATP5EP2Q5VTU8 51 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 SVEP1Q4LDE5 3571 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 RELNP78509 3460 aa5.52□□□□□ -1.53
SCN8A-212ENST00000636945 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
SCN8A-212ENST00000636945 RS1O15537 224 aa5.51□□□□□ -1.53
SCN8A-212ENST00000636945 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
SCN8A-212ENST00000636945 IGHV3-73A0A0B4J1V6 119 aa5.51□□□□□ -1.53
SCN8A-212ENST00000636945 TRBV10-3A0A0K0K1G6 114 aa5.51□□□□□ -1.53
SCN8A-212ENST00000636945 A0A1W2PPR1 153 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms