RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 CSDC2Q9Y534 153 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 SMIM1B2RUZ4 78 aa10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 PF4P02776 101 aa10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 PRIMA1Q86XR5 153 aa10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 DEFB112Q30KQ8 113 aa10.66□□□□□ -0.7
CACNA1A-220ENST00000635988 SOSTDC1Q6X4U4 206 aa10.66□□□□□ -0.7
CACNA1A-220ENST00000635988 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
CACNA1A-220ENST00000635988 CEP295Q9C0D2 2601 aa10.66□□□□□ -0.7
CACNA1A-220ENST00000635988 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 Q8N2B8 174 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 PRM2P04554 102 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
CACNA1A-220ENST00000635988 UQCRQO14949 82 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 INSP01308 110 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 HIST2H2BCQ6DN03 193 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
CACNA1A-220ENST00000635988 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
CACNA1A-220ENST00000635988 HIVEP3Q5T1R4 2406 aa10.63□□□□□ -0.71
CACNA1A-220ENST00000635988 C5orf38Q86SI9 138 aa10.62□□□□□ -0.71
CACNA1A-220ENST00000635988 TRBV10-1A0A0K0K1A3 114 aa10.62□□□□□ -0.71
CACNA1A-220ENST00000635988 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-220ENST00000635988 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-220ENST00000635988 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-220ENST00000635988 TRAV13-1A0A0B4J241 112 aa10.61□□□□□ -0.71
CACNA1A-220ENST00000635988 NRGNQ92686 78 aa10.61□□□□□ -0.71
CACNA1A-220ENST00000635988 LINC00526Q96FQ7 95 aa10.61□□□□□ -0.71
CACNA1A-220ENST00000635988 F5H768 121 aa10.61□□□□□ -0.71
CACNA1A-220ENST00000635988 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
CACNA1A-220ENST00000635988 NDUFA7O95182 113 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 DSCR9P59020 149 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 CRPP02741 224 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 MALP21145 153 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 SLURP1P55000 103 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 C22orf24Q9Y442 160 aa10.6□□□□□ -0.71
CACNA1A-220ENST00000635988 FAM218AQ96MZ4 157 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 CDC42SE2Q9NRR3 84 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 SORL1Q92673 2214 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 J3QLI3 93 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 ZNF702PQ9H963 129 aa10.59□□□□□ -0.71
CACNA1A-220ENST00000635988 GNLYP22749 145 aa10.58□□□□□ -0.72
CACNA1A-220ENST00000635988 GAGE2AQ6NT46 116 aa10.58□□□□□ -0.72
CACNA1A-220ENST00000635988 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
CACNA1A-220ENST00000635988 ATRXP46100 2492 aa10.58□□□□□ -0.72
CACNA1A-220ENST00000635988 ZFHX3Q15911 3703 aa10.57□□□□□ -0.72
CACNA1A-220ENST00000635988 K7EQD1 137 aa10.57□□□□□ -0.72
CACNA1A-220ENST00000635988 C3orf56Q8N813 242 aa10.57□□□□□ -0.72
CACNA1A-220ENST00000635988 DYNLRB2Q8TF09 96 aa10.57□□□□□ -0.72
CACNA1A-220ENST00000635988 COX7CP15954 63 aa10.57□□□□□ -0.72
CACNA1A-220ENST00000635988 DNAL4O96015 105 aa10.56□□□□□ -0.72
CACNA1A-220ENST00000635988 C5orf47Q569G3 176 aa10.56□□□□□ -0.72
CACNA1A-220ENST00000635988 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
CACNA1A-220ENST00000635988 ATOX1O00244 68 aa10.56□□□□□ -0.72
CACNA1A-220ENST00000635988 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
CACNA1A-220ENST00000635988 H0YGX0 51 aa10.55□□□□□ -0.72
CACNA1A-220ENST00000635988 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
CACNA1A-220ENST00000635988 HIST1H4AP62805 103 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-220ENST00000635988 DEFB136Q30KP8 78 aa10.55□□□□□ -0.72
CACNA1A-220ENST00000635988 UBE2L6O14933 153 aa10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 Q9HAA7 133 aa10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 Q6YL49 198 aa10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 TMEM243Q9BU79 118 aa10.54□□□□□ -0.72
CACNA1A-220ENST00000635988 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 COX7B2Q8TF08 81 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 XCL2Q9UBD3 114 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 CRYGAP11844 174 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 DEFB114Q30KQ6 69 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 LINC00337Q8N6G1 96 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 Q96MF0 132 aa10.53□□□□□ -0.72
CACNA1A-220ENST00000635988 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.72
CACNA1A-220ENST00000635988 IGF2RP11717 2491 aa10.52□□□□□ -0.73
CACNA1A-220ENST00000635988 C18orf65Q6ZTR6 163 aa10.52□□□□□ -0.73
CACNA1A-220ENST00000635988 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.73
CACNA1A-220ENST00000635988 IGKV2-28A0A075B6P5 120 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 IGKV2D-28P01615 120 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 STHQ8IWL8 128 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 C1orf158Q8N1D5 194 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 A0A1B0GX51 115 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 SMIM11BQ8TCY0 68 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 C2orf48Q96LS8 159 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
CACNA1A-220ENST00000635988 Q6JHZ5 121 aa10.5□□□□□ -0.73
CACNA1A-220ENST00000635988 OBSCN-AS1Q96MR7 158 aa10.5□□□□□ -0.73
CACNA1A-220ENST00000635988 J3KT08 172 aa10.5□□□□□ -0.73
CACNA1A-220ENST00000635988 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
CACNA1A-220ENST00000635988 LINC00158P58513 81 aa10.49□□□□□ -0.73
CACNA1A-220ENST00000635988 RPL18AQ02543 176 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-220ENST00000635988 Q6ZTI0 123 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms