RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 PRB3Q04118 309 aaPredicted RBP5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 HSD52Q0P140 79 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 LDLRAD2Q5SZI1 272 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 C2orf91Q6ZV80 131 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 GTF2H5Q6ZYL4 71 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 VPS25Q9BRG1 176 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 CST9LQ9H4G1 147 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 MALRD1Q5VYJ5 2156 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 JMJD1CQ15652 2540 aa5.01□□□□□ -1.61
SMARCA2-243ENST00000635590 PLXNB1O43157 2135 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 CSPG4Q6UVK1 2322 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 NDUFA3O95167 84 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 RPL7P18124 248 aaKnown RBP5□□□□□ -1.61
SMARCA2-243ENST00000635590 OCIAD2Q56VL3 154 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 SAMD13Q5VXD3 122 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 AMN1Q8IY45 258 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 C21orf62Q9NYP8 219 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 FLNAP21333 2647 aaKnown RBP5□□□□□ -1.61
SMARCA2-243ENST00000635590 IGKV2-40A0A087WW87 121 aaPredicted RBP5□□□□□ -1.61
SMARCA2-243ENST00000635590 A0A096LNJ9 63 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 H3BRM9 83 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 K7ERU9 68 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 IGKV2D-40P01614 121 aaPredicted RBP5□□□□□ -1.61
SMARCA2-243ENST00000635590 CKS2P33552 79 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 HES1Q14469 280 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 MRPL51Q4U2R6 128 aaKnown RBP5□□□□□ -1.61
SMARCA2-243ENST00000635590 PSMG4Q5JS54 123 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 FER1L6-AS1Q8NA97 138 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 OR4X2Q8NGF9 303 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 IFI27L1Q96BM0 104 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 DNAJC30Q96LL9 226 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 RABAC1Q9UI14 185 aa5□□□□□ -1.61
SMARCA2-243ENST00000635590 NSD1Q96L73 2696 aaPredicted RBP4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 TMEM223A0PJW6 202 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 COL6A5A8TX70 2615 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 LYNX1G3V0Z9 82 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 LYNX1P0DP58 116 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 SMR3AQ99954 134 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 HILPDAQ9Y5L2 63 aa4.99□□□□□ -1.61
SMARCA2-243ENST00000635590 ZNF469Q96JG9 3925 aaPredicted RBP4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 M0R1W7 72 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 LST1O00453 97 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 COX7A2LO14548 114 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 INAFM2P0DMQ5 153 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 S4R3C0 116 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 STAB1Q9NY15 2570 aa4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 FN1P02751 2386 aaKnown RBP4.98□□□□□ -1.61
SMARCA2-243ENST00000635590 A8MUN3 132 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 K7EP34 96 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 NPYP01303 97 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 LGALS1P09382 135 aaKnown RBP4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 IGLC6P0CF74 106 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 PRB4P10163 310 aaPredicted RBP4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 DEFB113Q30KQ7 82 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 TTC9CQ8N5M4 171 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 WFDC11Q8NEX6 87 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 NXT2Q9NPJ8 142 aaKnown RBP4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 AKAP6Q13023 2319 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 ODF3BA8MYP8 253 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 OOSP1A8MZH6 123 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 Q8TAT8 98 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
SMARCA2-243ENST00000635590 NBEAL1Q6ZS30 2694 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 FABP5P3A8MUU1 101 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 H3BUT2 72 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 FCER1GP30273 86 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 KLRD1Q13241 179 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 OR5A1Q8NGJ0 315 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 B9D2Q9BPU9 175 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 CNFNQ9BYD5 112 aa4.96□□□□□ -1.62
SMARCA2-243ENST00000635590 ATRQ13535 2644 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 RBAKDNA6NC62 111 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 LINC01546A6NGU7 62 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 NDUFC2O95298 119 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 ZNF80P51504 273 aaPredicted RBP4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 FXYD7P58549 80 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 NDPQ00604 133 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 LINC01560Q8TB33 94 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 SLC50A1Q9BRV3 221 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 CYSLTR1Q9Y271 337 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 A0A1W2PPM0 123 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 IGKCP01834 107 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 FABP2P12104 132 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 MINOS1Q5TGZ0 78 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 VMO1Q7Z5L0 202 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 RAB37Q96AX2 223 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 SMAD5-AS1Q9Y6J3 95 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 MINOS1-NBL1R4GNA1 71 aa4.95□□□□□ -1.62
SMARCA2-243ENST00000635590 FBN1P35555 2871 aaKnown RBP4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 DPM2O94777 84 aa4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 CTSGP08311 255 aa4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 HLA-DRB4P13762 266 aa4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 HLA-DMBP28068 263 aa4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 DYNAPQ8N1N2 210 aa4.94□□□□□ -1.62
SMARCA2-243ENST00000635590 Q8N6K4 173 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms