RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CEND1Q8N111 149 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 PRO0255Q9UI72 69 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 PAX4O43316 350 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 FABP2P12104 132 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 CRYBA4P53673 196 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 ZFAND6Q6FIF0 208 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 TRAV26-2A0A0B4J265 109 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 SUMO4Q6EEV6 95 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 NEGR1Q7Z3B1 354 aa10.12□□□□□ -0.79
LINC00339-208ENST00000634934 TRBV6-4A0A1B0GX49 114 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 E9PLD3 99 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 H3BUT2 72 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 K7EQD1 137 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 P0DMU3 169 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-208ENST00000634934 SCGB3A1Q96QR1 104 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
LINC00339-208ENST00000634934 IGLL5B9A064 214 aa10.1□□□□□ -0.79
LINC00339-208ENST00000634934 POLR2KP53803 58 aaKnown RBP10.1□□□□□ -0.79
LINC00339-208ENST00000634934 RHOHQ15669 191 aa10.1□□□□□ -0.79
LINC00339-208ENST00000634934 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
LINC00339-208ENST00000634934 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
LINC00339-208ENST00000634934 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
LINC00339-208ENST00000634934 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
LINC00339-208ENST00000634934 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 GYPEP15421 78 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 PCP4P48539 62 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 FXYD2P54710 66 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 SPCS1Q9Y6A9 102 aa10.09□□□□□ -0.79
LINC00339-208ENST00000634934 KMT2CQ8NEZ4 4911 aaKnown RBP10.09□□□□□ -0.79
LINC00339-208ENST00000634934 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
LINC00339-208ENST00000634934 M0QY20 66 aa10.08□□□□□ -0.8
LINC00339-208ENST00000634934 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
LINC00339-208ENST00000634934 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
LINC00339-208ENST00000634934 Q9UF83 564 aa10.08□□□□□ -0.8
LINC00339-208ENST00000634934 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-208ENST00000634934 TRBV27A0A0K0K1C4 114 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 MYMXA0A1B0GTQ4 84 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 VCYO14598 125 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 GCSHP23434 173 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 GAGE4Q13068 117 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 GAGE5Q13069 117 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 TRBV10-1A0A0K0K1A3 114 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
LINC00339-208ENST00000634934 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
LINC00339-208ENST00000634934 PLECQ15149 4684 aaKnown RBP10.06□□□□□ -0.8
LINC00339-208ENST00000634934 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
LINC00339-208ENST00000634934 H3BNG1 76 aa10.06□□□□□ -0.8
LINC00339-208ENST00000634934 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
LINC00339-208ENST00000634934 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
LINC00339-208ENST00000634934 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
LINC00339-208ENST00000634934 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
LINC00339-208ENST00000634934 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
LINC00339-208ENST00000634934 A0A096LPF7 62 aa10.05□□□□□ -0.8
LINC00339-208ENST00000634934 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
LINC00339-208ENST00000634934 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
LINC00339-208ENST00000634934 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 F8W1H4 67 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 LYSTQ99698 3801 aa10.04□□□□□ -0.8
LINC00339-208ENST00000634934 TMEM238LA0A1B0GVL6 79 aa10.03□□□□□ -0.8
LINC00339-208ENST00000634934 A6NJY4 79 aa10.03□□□□□ -0.8
LINC00339-208ENST00000634934 PMVKQ15126 192 aa10.03□□□□□ -0.8
LINC00339-208ENST00000634934 C11orf86A6NJI1 115 aa10.02□□□□□ -0.8
LINC00339-208ENST00000634934 HERVK_113P61574 105 aa10.02□□□□□ -0.8
LINC00339-208ENST00000634934 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.8
LINC00339-208ENST00000634934 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.8
LINC00339-208ENST00000634934 UBE2D3P61077 147 aa10.02□□□□□ -0.81
LINC00339-208ENST00000634934 UBE2D2P62837 147 aa10.02□□□□□ -0.81
LINC00339-208ENST00000634934 ATP6V0E2Q8NHE4 81 aa10.02□□□□□ -0.81
LINC00339-208ENST00000634934 VPS25Q9BRG1 176 aa10.02□□□□□ -0.81
LINC00339-208ENST00000634934 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
LINC00339-208ENST00000634934 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
LINC00339-208ENST00000634934 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 LINC00694P0DN24 101 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 NFE4Q86UQ8 179 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 APLNQ9ULZ1 77 aa10.01□□□□□ -0.81
LINC00339-208ENST00000634934 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
LINC00339-208ENST00000634934 TSHBP01222 138 aa10□□□□□ -0.81
LINC00339-208ENST00000634934 UBE2D1P51668 147 aa10□□□□□ -0.81
LINC00339-208ENST00000634934 COTL1Q14019 142 aa10□□□□□ -0.81
LINC00339-208ENST00000634934 TCTAP57738 103 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms