RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 C9orf85Q96MD7 179 aa10.52□□□□□ -0.72
UBE3A-220ENST00000630424 TMEM258P61165 79 aa10.52□□□□□ -0.73
UBE3A-220ENST00000630424 CDPF1Q6NVV7 123 aa10.52□□□□□ -0.73
UBE3A-220ENST00000630424 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
UBE3A-220ENST00000630424 IGKV4-1P06312 121 aa10.52□□□□□ -0.73
UBE3A-220ENST00000630424 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
UBE3A-220ENST00000630424 PCNX3Q9H6A9 2034 aa10.51□□□□□ -0.73
UBE3A-220ENST00000630424 PROK1P58294 105 aa10.51□□□□□ -0.73
UBE3A-220ENST00000630424 HIGD1BQ9P298 99 aa10.51□□□□□ -0.73
UBE3A-220ENST00000630424 RBX1P62877 108 aa10.51□□□□□ -0.73
UBE3A-220ENST00000630424 TRBV10-2A0A0K0K1G8 114 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 AVPP01185 164 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 MIAQ16674 131 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 TEN1Q86WV5 123 aa10.5□□□□□ -0.73
UBE3A-220ENST00000630424 LINC00526Q96FQ7 95 aa10.49□□□□□ -0.73
UBE3A-220ENST00000630424 C11orf1Q9H5F2 150 aa10.49□□□□□ -0.73
UBE3A-220ENST00000630424 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
UBE3A-220ENST00000630424 H7C423 109 aa10.48□□□□□ -0.73
UBE3A-220ENST00000630424 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
UBE3A-220ENST00000630424 PDE6GP18545 87 aa10.48□□□□□ -0.73
UBE3A-220ENST00000630424 NANOS2P60321 138 aaKnown RBP10.48□□□□□ -0.73
UBE3A-220ENST00000630424 M0QY20 66 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 BPY2O14599 106 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 IGLV2-8P01709 118 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 WFDC2Q14508 124 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 IGLV4-3A0A075B6K6 122 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 A0A0J9YWU9 116 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 A0A1B0GXF2 115 aa10.47□□□□□ -0.73
UBE3A-220ENST00000630424 PRM2P04554 102 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 UBE2D1P51668 147 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 ACANP16112 2415 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 LTBP2Q14767 1821 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 MUC4Q99102 2169 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 H3BT86 120 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 CLUHP3Q96NS8 147 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 PPDPFQ9H3Y8 114 aa10.46□□□□□ -0.73
UBE3A-220ENST00000630424 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.74
UBE3A-220ENST00000630424 IGKV2D-28P01615 120 aa10.46□□□□□ -0.74
UBE3A-220ENST00000630424 Q8N6K4 173 aa10.46□□□□□ -0.74
UBE3A-220ENST00000630424 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
UBE3A-220ENST00000630424 FOXI1Q12951 378 aa10.45□□□□□ -0.74
UBE3A-220ENST00000630424 CRIP3Q6Q6R5 217 aa10.45□□□□□ -0.74
UBE3A-220ENST00000630424 SPINK6Q6UWN8 80 aa10.45□□□□□ -0.74
UBE3A-220ENST00000630424 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
UBE3A-220ENST00000630424 IBA57-AS1B1ANH7 110 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 FAM236AA0A1B0GUQ0 79 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 FAM236BA0A1B0GV22 79 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
UBE3A-220ENST00000630424 DCANP1Q8TF63 244 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 TNRC6BQ9UPQ9 1833 aaKnown RBP10.44□□□□□ -0.74
UBE3A-220ENST00000630424 CASC2Q6XLA1 102 aa10.44□□□□□ -0.74
UBE3A-220ENST00000630424 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 LELP1Q5T871 98 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 SEC61GP60059 68 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 EIF4EBP1Q13541 118 aaPredicted RBP10.43□□□□□ -0.74
UBE3A-220ENST00000630424 ZNF295-AS1Q8N0V1 137 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 UBE2D4Q9Y2X8 147 aa10.43□□□□□ -0.74
UBE3A-220ENST00000630424 ATOX1O00244 68 aa10.42□□□□□ -0.74
UBE3A-220ENST00000630424 KIAA1549Q9HCM3 1950 aa10.42□□□□□ -0.74
UBE3A-220ENST00000630424 C6orf99Q4VX62 202 aa10.42□□□□□ -0.74
UBE3A-220ENST00000630424 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
UBE3A-220ENST00000630424 CRIP1P50238 77 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 PTH2Q96A98 100 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 NDUFA7O95182 113 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 OBSL1O75147 1896 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 B5MCH6 92 aa10.41□□□□□ -0.74
UBE3A-220ENST00000630424 SLPIP03973 132 aa10.4□□□□□ -0.74
UBE3A-220ENST00000630424 C1orf158Q8N1D5 194 aa10.4□□□□□ -0.74
UBE3A-220ENST00000630424 RETNQ9HD89 108 aa10.4□□□□□ -0.74
UBE3A-220ENST00000630424 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
UBE3A-220ENST00000630424 SPATA12Q7Z6I5 190 aa10.39□□□□□ -0.75
UBE3A-220ENST00000630424 LINC00308Q8TCZ7 52 aa10.39□□□□□ -0.75
UBE3A-220ENST00000630424 UPK3BQ9BT76 320 aa10.39□□□□□ -0.75
UBE3A-220ENST00000630424 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
UBE3A-220ENST00000630424 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
UBE3A-220ENST00000630424 ZNF106Q9H2Y7 1883 aaKnown RBP10.38□□□□□ -0.75
UBE3A-220ENST00000630424 RNASE3P12724 160 aaKnown RBP10.38□□□□□ -0.75
UBE3A-220ENST00000630424 BRI3O95415 125 aa10.38□□□□□ -0.75
UBE3A-220ENST00000630424 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
UBE3A-220ENST00000630424 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 PRR9Q5T870 116 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 A8MZ25 164 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 CENPFP49454 3210 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 KLLNB2CW77 178 aa10.37□□□□□ -0.75
UBE3A-220ENST00000630424 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
UBE3A-220ENST00000630424 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
UBE3A-220ENST00000630424 TAX1BP3O14907 124 aa10.36□□□□□ -0.75
UBE3A-220ENST00000630424 UBE2D3P61077 147 aa10.36□□□□□ -0.75
UBE3A-220ENST00000630424 HRCT1Q6UXD1 115 aa10.36□□□□□ -0.75
UBE3A-220ENST00000630424 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms