RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-209ENST00000627620 LINC01006Q8NI28 216 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 DSCAMO60469 2012 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
SCN8A-209ENST00000627620 MAPKAPK5-AS1Q8N8E1 139 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
SCN8A-209ENST00000627620 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
SCN8A-209ENST00000627620 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
SCN8A-209ENST00000627620 J3KT08 172 aa9.48□□□□□ -0.89
SCN8A-209ENST00000627620 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
SCN8A-209ENST00000627620 C18orf65Q6ZTR6 163 aa9.48□□□□□ -0.89
SCN8A-209ENST00000627620 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
SCN8A-209ENST00000627620 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
SCN8A-209ENST00000627620 WFDC10AQ9H1F0 79 aa9.47□□□□□ -0.89
SCN8A-209ENST00000627620 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.89
SCN8A-209ENST00000627620 RBX1P62877 108 aa9.46□□□□□ -0.89
SCN8A-209ENST00000627620 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.89
SCN8A-209ENST00000627620 HIVEP3Q5T1R4 2406 aa9.46□□□□□ -0.89
SCN8A-209ENST00000627620 Q6ZS46 218 aa9.46□□□□□ -0.89
SCN8A-209ENST00000627620 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.9
SCN8A-209ENST00000627620 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
SCN8A-209ENST00000627620 PRR9Q5T870 116 aa9.46□□□□□ -0.9
SCN8A-209ENST00000627620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.9
SCN8A-209ENST00000627620 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 PCNX3Q9H6A9 2034 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 TRIAP1O43715 76 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 SDIM1Q6ZPB5 146 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 A8MZ25 164 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 TSHBP01222 138 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 NDUFC2O95298 119 aa9.45□□□□□ -0.9
SCN8A-209ENST00000627620 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 SEC61GP60059 68 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 C6orf99Q4VX62 202 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 MYO18BQ8IUG5 2567 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 NAV2Q8IVL1 2488 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
SCN8A-209ENST00000627620 KLLNB2CW77 178 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 NRACQ8N912 160 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 KPRPQ5T749 579 aaPredicted RBP9.43□□□□□ -0.9
SCN8A-209ENST00000627620 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 PRM2P04554 102 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 NUP210LQ5VU65 1888 aa9.43□□□□□ -0.9
SCN8A-209ENST00000627620 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
SCN8A-209ENST00000627620 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
SCN8A-209ENST00000627620 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
SCN8A-209ENST00000627620 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
SCN8A-209ENST00000627620 KIAA1549Q9HCM3 1950 aa9.42□□□□□ -0.9
SCN8A-209ENST00000627620 CDSNQ15517 529 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 NAV3Q8IVL0 2385 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 ENHOQ6UWT2 76 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 CCDC168Q8NDH2 2452 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 MT-ATP8P03928 68 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 YPEL4Q96NS1 127 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 UBE2D4Q9Y2X8 147 aa9.41□□□□□ -0.9
SCN8A-209ENST00000627620 LELP1Q5T871 98 aa9.4□□□□□ -0.9
SCN8A-209ENST00000627620 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
SCN8A-209ENST00000627620 C20orf197Q8N268 126 aa9.4□□□□□ -0.9
SCN8A-209ENST00000627620 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
SCN8A-209ENST00000627620 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
SCN8A-209ENST00000627620 CCKP06307 115 aa9.4□□□□□ -0.91
SCN8A-209ENST00000627620 C7orf33Q8WU49 177 aa9.4□□□□□ -0.91
SCN8A-209ENST00000627620 PLXNB1O43157 2135 aa9.39□□□□□ -0.91
SCN8A-209ENST00000627620 M0R2N4 97 aa9.39□□□□□ -0.91
SCN8A-209ENST00000627620 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
SCN8A-209ENST00000627620 TIMM17BO60830 172 aa9.39□□□□□ -0.91
SCN8A-209ENST00000627620 ATP5EP2Q5VTU8 51 aa9.39□□□□□ -0.91
SCN8A-209ENST00000627620 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
SCN8A-209ENST00000627620 NDUFV3P56181 108 aaKnown RBP9.38□□□□□ -0.91
SCN8A-209ENST00000627620 AVPP01185 164 aa9.38□□□□□ -0.91
SCN8A-209ENST00000627620 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
SCN8A-209ENST00000627620 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
SCN8A-209ENST00000627620 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 M0R378 163 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 TANC2Q9HCD6 1990 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
SCN8A-209ENST00000627620 Q6ZQY7 126 aa9.37□□□□□ -0.91
SCN8A-209ENST00000627620 ABCA2Q9BZC7 2435 aa9.36□□□□□ -0.91
SCN8A-209ENST00000627620 UBE2D1P51668 147 aa9.36□□□□□ -0.91
SCN8A-209ENST00000627620 NCOR2Q9Y618 2525 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 DHRS4-AS1Q9P1J3 65 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 UQCRQO14949 82 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 MRGPRG-AS1Q2M3A8 158 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 UBE2D3P61077 147 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 UBE2D2P62837 147 aa9.35□□□□□ -0.91
SCN8A-209ENST00000627620 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
SCN8A-209ENST00000627620 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
SCN8A-209ENST00000627620 PLA2G2AP14555 144 aa9.34□□□□□ -0.91
SCN8A-209ENST00000627620 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
SCN8A-209ENST00000627620 EDN2P20800 178 aa9.34□□□□□ -0.91
SCN8A-209ENST00000627620 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
SCN8A-209ENST00000627620 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms