RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
SNX1-214ENST00000625244 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
SNX1-214ENST00000625244 hDV102S1A0JD36 115 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 M0QY20 66 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 SNAPINO95295 136 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
SNX1-214ENST00000625244 MIAQ16674 131 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 C10orf91Q5T1B1 145 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 SVBPQ8N300 66 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 BTF3L4Q96K17 158 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 IMMP2LQ96T52 175 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 NIT2Q9NQR4 276 aa8.58□□□□□ -1.04
SNX1-214ENST00000625244 UBE2D3P61077 147 aa8.57□□□□□ -1.04
SNX1-214ENST00000625244 UBE2D2P62837 147 aa8.57□□□□□ -1.04
SNX1-214ENST00000625244 MRAP2Q96G30 205 aa8.57□□□□□ -1.04
SNX1-214ENST00000625244 C7orf77A4D0Y5 90 aa8.56□□□□□ -1.04
SNX1-214ENST00000625244 PPP1R17O96001 155 aa8.56□□□□□ -1.04
SNX1-214ENST00000625244 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
SNX1-214ENST00000625244 AMN1Q8IY45 258 aa8.56□□□□□ -1.04
SNX1-214ENST00000625244 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
SNX1-214ENST00000625244 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 RAB4AP20338 218 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 COX6A2Q02221 97 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 PRR4Q16378 134 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 CLPSL2Q6UWE3 100 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
SNX1-214ENST00000625244 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
SNX1-214ENST00000625244 A0A1B0GXF2 115 aa8.54□□□□□ -1.04
SNX1-214ENST00000625244 FAM104BQ5XKR9 115 aa8.54□□□□□ -1.04
SNX1-214ENST00000625244 STPG4Q8N801 248 aa8.54□□□□□ -1.04
SNX1-214ENST00000625244 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
SNX1-214ENST00000625244 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 CKS2P33552 79 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 PKIAP61925 76 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 SLC7A5P1Q8MH63 180 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
SNX1-214ENST00000625244 TRBV25-1A0A075B6N4 114 aa8.52□□□□□ -1.05
SNX1-214ENST00000625244 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
SNX1-214ENST00000625244 COTL1Q14019 142 aa8.52□□□□□ -1.05
SNX1-214ENST00000625244 PRSS3P2Q8NHM4 247 aa8.52□□□□□ -1.05
SNX1-214ENST00000625244 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
SNX1-214ENST00000625244 IGHV1-24A0A0C4DH33 117 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 PPBPP02775 128 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 PMCHP20382 165 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 Q6ZRP5 223 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
SNX1-214ENST00000625244 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 TRBV6-5A0A0K0K1A5 114 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 SDHAF1A6NFY7 115 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 NCR2O95944 276 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 COX19Q49B96 90 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
SNX1-214ENST00000625244 ZNF664Q8N3J9 261 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
SNX1-214ENST00000625244 D6R8Y8 96 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 I3L3M4 83 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 UBE2L6O14933 153 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 AMTP48728 403 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
SNX1-214ENST00000625244 APCSP02743 223 aa8.48□□□□□ -1.05
SNX1-214ENST00000625244 FCER1GP30273 86 aa8.48□□□□□ -1.05
SNX1-214ENST00000625244 SUMO2P61956 95 aaKnown RBP8.48□□□□□ -1.05
SNX1-214ENST00000625244 KIR2DL4Q99706 377 aa8.48□□□□□ -1.05
SNX1-214ENST00000625244 VCYO14598 125 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 TCAPO15273 167 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 MT-ND6P03923 174 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
SNX1-214ENST00000625244 RBX1P62877 108 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 IQCJQ1A5X6 159 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 TMEM136Q6ZRR5 245 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
SNX1-214ENST00000625244 A0A096LNI7 61 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 NTM-AS1Q6ZSK4 140 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 NRACQ8N912 160 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 PRELID3AQ96N28 172 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 GNB1LQ9BYB4 327 aa8.46□□□□□ -1.06
SNX1-214ENST00000625244 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
SNX1-214ENST00000625244 TRBV27A0A0K0K1C4 114 aa8.45□□□□□ -1.06
SNX1-214ENST00000625244 GAGE6Q13070 117 aa8.45□□□□□ -1.06
SNX1-214ENST00000625244 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
SNX1-214ENST00000625244 REG3AQ06141 175 aa8.44□□□□□ -1.06
SNX1-214ENST00000625244 SMAGPQ0VAQ4 97 aa8.44□□□□□ -1.06
SNX1-214ENST00000625244 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
SNX1-214ENST00000625244 MAP1LC3AQ9H492 121 aa8.44□□□□□ -1.06
SNX1-214ENST00000625244 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
SNX1-214ENST00000625244 H7C423 109 aa8.43□□□□□ -1.06
SNX1-214ENST00000625244 NPYP01303 97 aa8.43□□□□□ -1.06
SNX1-214ENST00000625244 RAB5AP20339 215 aa8.43□□□□□ -1.06
SNX1-214ENST00000625244 RPL32P62910 135 aaKnown RBP8.43□□□□□ -1.06
SNX1-214ENST00000625244 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms