RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 BRK1Q8WUW1 75 aa0.25□□□□□ -2.37
CDKL5-207ENST00000624700 SKA2Q8WVK7 121 aaPredicted RBP0.25□□□□□ -2.37
CDKL5-207ENST00000624700 DDA1Q9BW61 102 aa0.25□□□□□ -2.37
CDKL5-207ENST00000624700 HELZP42694 1942 aaKnown RBP0.25□□□□□ -2.37
CDKL5-207ENST00000624700 DNAH2Q9P225 4427 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 NEXMIFQ5QGS0 1516 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 IGHV1-24A0A0C4DH33 117 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 PSPHP78330 225 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 UNQ5815/PRO19632Q6UWF5 114 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 OTOSQ8NHW6 89 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 PPP1R1CQ8WVI7 109 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 SPRR2FQ96RM1 72 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 TMEM14BQ9NUH8 114 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 COMMD3Q9UBI1 195 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 MYO3AQ8NEV4 1616 aa0.24□□□□□ -2.37
CDKL5-207ENST00000624700 ATP7BP35670 1465 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 HIST1H1BP16401 226 aaKnown RBP0.23□□□□□ -2.37
CDKL5-207ENST00000624700 RPL7P18124 248 aaKnown RBP0.23□□□□□ -2.37
CDKL5-207ENST00000624700 ADCYAP1P18509 176 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 S100GP29377 79 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 SMIM15Q7Z3B0 74 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 TMEM35BQ8NCS4 154 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 VPS25Q9BRG1 176 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 LINC00846Q9NV44 126 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 TIAM1Q13009 1591 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 LMTK2Q8IWU2 1503 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 DNAH11Q96DT5 4516 aa0.23□□□□□ -2.37
CDKL5-207ENST00000624700 PLXNA1Q9UIW2 1896 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 PRG4Q92954 1404 aaPredicted RBP0.22□□□□□ -2.37
CDKL5-207ENST00000624700 TRBV10-1A0A0K0K1A3 114 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 M0QZK8 103 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 IL7P13232 177 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 POLR2JP52435 117 aaKnown RBP0.22□□□□□ -2.37
CDKL5-207ENST00000624700 METTL1Q9UBP6 276 aaKnown RBP0.22□□□□□ -2.37
CDKL5-207ENST00000624700 SAMD9LQ8IVG5 1584 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
CDKL5-207ENST00000624700 OVOS2A0A0G2JMS6 1433 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 ARAP2Q8WZ64 1704 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 FLGP20930 4061 aaPredicted RBP0.21□□□□□ -2.38
CDKL5-207ENST00000624700 SCRIBQ14160 1630 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 DIP2CQ9Y2E4 1556 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 TEX49A0A1B0GTD5 131 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 IGKCP01834 107 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 APOC1P02654 83 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 PCBD1P61457 104 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 PPDPFLQ8WWR9 84 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 DSCR8Q96T75 97 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 RGPD3A6NKT7 1758 aaPredicted RBP0.21□□□□□ -2.38
CDKL5-207ENST00000624700 RGPD4Q7Z3J3 1758 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 RICTORQ6R327 1708 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 TIAM2Q8IVF5 1701 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 CLIP1P30622 1438 aa0.21□□□□□ -2.38
CDKL5-207ENST00000624700 EIF2AK4Q9P2K8 1649 aaKnown RBP0.2□□□□□ -2.38
CDKL5-207ENST00000624700 A0A096LNT2 108 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 TRAV2A0A0B4J234 112 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 TSTD3H0UI37 97 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 J3KT08 172 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 DPM2O94777 84 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 CD3DP04234 171 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 PLGLB1Q02325 96 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 DEPDC5O75140 1603 aa0.2□□□□□ -2.38
CDKL5-207ENST00000624700 MROH2BQ7Z745 1585 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 MUC22E2RYF6 1773 aaPredicted RBP0.19□□□□□ -2.38
CDKL5-207ENST00000624700 ZFYVE16Q7Z3T8 1539 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 C5P01031 1676 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 CCKP06307 115 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 RPS28P62857 69 aaKnown RBP0.19□□□□□ -2.38
CDKL5-207ENST00000624700 HSD17B12Q53GQ0 312 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 OR8I2Q8N0Y5 310 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 MAGOHBQ96A72 148 aaKnown RBP0.19□□□□□ -2.38
CDKL5-207ENST00000624700 SPANXCQ9NY87 97 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 COA4Q9NYJ1 87 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 TAS2R8Q9NYW2 309 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 HSPB11Q9Y547 144 aa0.19□□□□□ -2.38
CDKL5-207ENST00000624700 ABCC1P33527 1531 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 UHRF1BP1LA0JNW5 1464 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 CLTCL1P53675 1640 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 TRAV12-2A0A075B6T6 113 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 OR2H2O95918 312 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 IQCJQ1A5X6 159 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 SELENOSQ9BQE4 189 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 SLC35B3Q9H1N7 401 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 HFM1A2PYH4 1435 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 KNDC1Q76NI1 1749 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 KIAA1551Q9HCM1 1747 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 QRICH2Q9H0J4 1663 aa0.18□□□□□ -2.38
CDKL5-207ENST00000624700 CCDC171Q6TFL3 1326 aa0.17□□□□□ -2.38
CDKL5-207ENST00000624700 SLC25A5P05141 298 aaKnown RBP0.17□□□□□ -2.38
CDKL5-207ENST00000624700 MPC1LP0DKB6 136 aa0.17□□□□□ -2.38
CDKL5-207ENST00000624700 MON2Q7Z3U7 1717 aa0.17□□□□□ -2.38
CDKL5-207ENST00000624700 SPANXA1Q9NS26 97 aa0.17□□□□□ -2.38
CDKL5-207ENST00000624700 CPDO75976 1380 aa0.17□□□□□ -2.38
CDKL5-207ENST00000624700 PTPN23Q9H3S7 1636 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 A2ML1A8K2U0 1454 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 SPAARA0A1B0GVQ0 90 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 YPEL1O60688 119 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 TCRAP04437 139 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 VMO1Q7Z5L0 202 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms