RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.37□□□□□ -1.87
RPRD1B-209ENST00000622494 DNAJC30Q96LL9 226 aa3.37□□□□□ -1.87
RPRD1B-209ENST00000622494 PRELID3AQ96N28 172 aa3.37□□□□□ -1.87
RPRD1B-209ENST00000622494 PRADC1Q9BSG0 188 aa3.37□□□□□ -1.87
RPRD1B-209ENST00000622494 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 LOC389332A0A1B0GUA5 103 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 VCYO14598 125 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 PPP1R17O96001 155 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 LINC00694P0DN24 101 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 SRIP30626 198 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 UBE2D3P61077 147 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 UBE2D2P62837 147 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 RHOHQ15669 191 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 OR10J3Q5JRS4 329 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 PET117Q6UWS5 81 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 Q6ZRN7 208 aaPredicted RBP3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 SPATA12Q7Z6I5 190 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 C6orf223Q8N319 242 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 DEFB104AQ8WTQ1 72 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 C20orf78Q9BR46 151 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 Q9H8V8 135 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 ST20Q9HBF5 79 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 HERC1Q15751 4861 aa3.36□□□□□ -1.87
RPRD1B-209ENST00000622494 IGLV5-52A0A0A0MRZ9 124 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 IGHV3-38A0A0C4DH36 116 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 SDHAF1A6NFY7 115 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 C16orf90A8MZG2 172 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 PMCHP20382 165 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 IFI27P40305 119 aaPredicted RBP3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 CCL18P55774 89 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 RPL32P62910 135 aaKnown RBP3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 Q0VG73 95 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 IQCJQ1A5X6 159 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 LYPD5Q6UWN5 251 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 LINC00336Q6ZUF6 198 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 NEGR1Q7Z3B1 354 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 NIT1Q86X76 327 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 C15orf53Q8NAA6 179 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 C18orf32Q8TCD1 76 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 TMEM70Q9BUB7 260 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 LAMTOR2Q9Y2Q5 125 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 MRPS16Q9Y3D3 137 aaKnown RBP3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
RPRD1B-209ENST00000622494 TRBV27A0A0K0K1C4 114 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 LINC01546A6NGU7 62 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 KRTAP29-1A8MX34 341 aaPredicted RBP3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 C1orf196B1AJZ1 125 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 I3L3M4 83 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 TCAPO15273 167 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 NUPR1O60356 82 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BKO60814 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 TSHBP01222 138 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BJP06899 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 LINC00614P0C842 121 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BOP23527 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BBP33778 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BDP58876 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BCP62807 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 WFDC2Q14508 124 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST2H2BEQ16778 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 DAZ4Q86SG3 579 aaKnown RBP3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 Q8N8P6 123 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BHQ93079 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BNQ99877 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 HIST1H2BMQ99879 126 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 GTSF1LQ9H1H1 148 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 MAP1LC3AQ9H492 121 aa3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 DAZ3Q9NR90 486 aaKnown RBP3.34□□□□□ -1.87
RPRD1B-209ENST00000622494 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.88
RPRD1B-209ENST00000622494 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 TRBV6-8A0A0A6YYG3 113 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 ESDP10768 282 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 NDUFA6P56556 154 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 SH2D6Q7Z4S9 175 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 KIR2DL4Q99706 377 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 NXT2Q9NPJ8 142 aaKnown RBP3.33□□□□□ -1.88
RPRD1B-209ENST00000622494 LECT2O14960 151 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 IGHV3-33P01772 117 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 PRSS2P07478 247 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 IGHV3-30-3P0DP02 117 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 RAB5BP61020 215 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 COTL1Q14019 142 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 LAGE3Q14657 143 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 LINC01620Q4KN68 170 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 TMEM97Q5BJF2 176 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 LELP1Q5T871 98 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 BAGE3Q86Y29 109 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 MAPKAPK5-AS1Q8N8E1 139 aa3.32□□□□□ -1.88
RPRD1B-209ENST00000622494 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms