RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RPS10P5Q9NQ39 176 aa13.93□□□□□ -0.18
PMPCA-212ENST00000622209 DNAH8Q96JB1 4490 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 MYCBP2O75592 4640 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 NPYP01303 97 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 FGF6P10767 208 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 ZNF25P17030 456 aaPredicted RBP13.92□□□□□ -0.18
PMPCA-212ENST00000622209 PRELID3AQ96N28 172 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 LAMTOR2Q9Y2Q5 125 aa13.92□□□□□ -0.18
PMPCA-212ENST00000622209 DMBT1Q9UGM3 2413 aaPredicted RBP13.92□□□□□ -0.18
PMPCA-212ENST00000622209 APOC3P02656 99 aa13.91□□□□□ -0.18
PMPCA-212ENST00000622209 RNASEKQ6P5S7 137 aaKnown RBP13.91□□□□□ -0.18
PMPCA-212ENST00000622209 CLPSL2Q6UWE3 100 aa13.91□□□□□ -0.18
PMPCA-212ENST00000622209 SMIM2Q9BVW6 85 aa13.91□□□□□ -0.18
PMPCA-212ENST00000622209 TRAV8-4A0A0B4J246 113 aa13.9□□□□□ -0.18
PMPCA-212ENST00000622209 FAM229AH3BQW9 127 aa13.9□□□□□ -0.18
PMPCA-212ENST00000622209 SVBPQ8N300 66 aa13.9□□□□□ -0.18
PMPCA-212ENST00000622209 SNAPINO95295 136 aa13.89□□□□□ -0.19
PMPCA-212ENST00000622209 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
PMPCA-212ENST00000622209 BAALCQ8WXS3 180 aa13.89□□□□□ -0.19
PMPCA-212ENST00000622209 TMEM101Q96IK0 257 aa13.89□□□□□ -0.19
PMPCA-212ENST00000622209 PRSS47A8MTI9 375 aa13.88□□□□□ -0.19
PMPCA-212ENST00000622209 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
PMPCA-212ENST00000622209 FAM30AQ9NZY2 134 aa13.88□□□□□ -0.19
PMPCA-212ENST00000622209 COX19Q49B96 90 aa13.87□□□□□ -0.19
PMPCA-212ENST00000622209 TMEM18Q96B42 140 aa13.87□□□□□ -0.19
PMPCA-212ENST00000622209 GNB1LQ9BYB4 327 aa13.87□□□□□ -0.19
PMPCA-212ENST00000622209 HLA-DQA1P01909 254 aa13.86□□□□□ -0.19
PMPCA-212ENST00000622209 WFDC2Q14508 124 aa13.86□□□□□ -0.19
PMPCA-212ENST00000622209 KRTAP26-1Q6PEX3 210 aa13.86□□□□□ -0.19
PMPCA-212ENST00000622209 OR5A1Q8NGJ0 315 aa13.86□□□□□ -0.19
PMPCA-212ENST00000622209 LECT2O14960 151 aa13.85□□□□□ -0.19
PMPCA-212ENST00000622209 MAP1LC3AQ9H492 121 aa13.85□□□□□ -0.19
PMPCA-212ENST00000622209 CSDC2Q9Y534 153 aaKnown RBP13.85□□□□□ -0.19
PMPCA-212ENST00000622209 IGLV10-54A0A075B6I4 117 aa13.84□□□□□ -0.19
PMPCA-212ENST00000622209 FLG2Q5D862 2391 aaPredicted RBP13.84□□□□□ -0.19
PMPCA-212ENST00000622209 RAB5AP20339 215 aa13.83□□□□□ -0.2
PMPCA-212ENST00000622209 DGAT2L7PQ6IED9 249 aa13.83□□□□□ -0.2
PMPCA-212ENST00000622209 TIMM21Q9BVV7 248 aa13.83□□□□□ -0.2
PMPCA-212ENST00000622209 CDC42SE2Q9NRR3 84 aa13.83□□□□□ -0.2
PMPCA-212ENST00000622209 C14orf177Q52M58 125 aa13.82□□□□□ -0.2
PMPCA-212ENST00000622209 ZNF664Q8N3J9 261 aa13.82□□□□□ -0.2
PMPCA-212ENST00000622209 UBE2D4Q9Y2X8 147 aa13.82□□□□□ -0.2
PMPCA-212ENST00000622209 LOC389332A0A1B0GUA5 103 aa13.81□□□□□ -0.2
PMPCA-212ENST00000622209 MT-ND6P03923 174 aa13.81□□□□□ -0.2
PMPCA-212ENST00000622209 Q8N8P6 123 aa13.81□□□□□ -0.2
PMPCA-212ENST00000622209 IGKV3OR2-268A0A0C4DH90 116 aa13.8□□□□□ -0.2
PMPCA-212ENST00000622209 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
PMPCA-212ENST00000622209 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.79□□□□□ -0.2
PMPCA-212ENST00000622209 KIAA1644Q3SXP7 199 aa13.79□□□□□ -0.2
PMPCA-212ENST00000622209 USP17L23D6RBM5 183 aa13.78□□□□□ -0.2
PMPCA-212ENST00000622209 K7EMI3 77 aa13.78□□□□□ -0.2
PMPCA-212ENST00000622209 NXT2Q9NPJ8 142 aaKnown RBP13.78□□□□□ -0.2
PMPCA-212ENST00000622209 LINC00959A0A1B0GUT2 108 aa13.77□□□□□ -0.21
PMPCA-212ENST00000622209 RPL39P62891 51 aaKnown RBP13.77□□□□□ -0.21
PMPCA-212ENST00000622209 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.21
PMPCA-212ENST00000622209 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
PMPCA-212ENST00000622209 TGIF2-C20orf24A0A0A6YYL0 155 aa13.76□□□□□ -0.21
PMPCA-212ENST00000622209 GAGE12HA6NDE8 117 aa13.76□□□□□ -0.21
PMPCA-212ENST00000622209 LINC01620Q4KN68 170 aa13.76□□□□□ -0.21
PMPCA-212ENST00000622209 MRPL18Q9H0U6 180 aaKnown RBP13.76□□□□□ -0.21
PMPCA-212ENST00000622209 CCL25O15444 150 aa13.75□□□□□ -0.21
PMPCA-212ENST00000622209 FABP9Q0Z7S8 132 aa13.75□□□□□ -0.21
PMPCA-212ENST00000622209 SS18Q15532 418 aa13.75□□□□□ -0.21
PMPCA-212ENST00000622209 ORMDL2Q53FV1 153 aa13.75□□□□□ -0.21
PMPCA-212ENST00000622209 ALKBH7Q9BT30 221 aaPredicted RBP13.75□□□□□ -0.21
PMPCA-212ENST00000622209 IFI27P40305 119 aaPredicted RBP13.73□□□□□ -0.21
PMPCA-212ENST00000622209 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
PMPCA-212ENST00000622209 Q6ZSA8 131 aa13.73□□□□□ -0.21
PMPCA-212ENST00000622209 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
PMPCA-212ENST00000622209 C1orf196B1AJZ1 125 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 PRSS1P07477 247 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 CFAP161Q6P656 301 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 Q6ZUT4 128 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 LINC00528Q8N1L1 170 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 TRAPPC1Q9Y5R8 145 aa13.72□□□□□ -0.21
PMPCA-212ENST00000622209 J3QL48 77 aa13.71□□□□□ -0.21
PMPCA-212ENST00000622209 PLA2G1BP04054 148 aaKnown RBP13.71□□□□□ -0.21
PMPCA-212ENST00000622209 G0S2P27469 103 aa13.71□□□□□ -0.21
PMPCA-212ENST00000622209 FOXI1Q12951 378 aa13.71□□□□□ -0.21
PMPCA-212ENST00000622209 YPEL4Q96NS1 127 aa13.71□□□□□ -0.21
PMPCA-212ENST00000622209 CYSLTR1Q9Y271 337 aa13.71□□□□□ -0.21
PMPCA-212ENST00000622209 XCL1P47992 114 aa13.7□□□□□ -0.22
PMPCA-212ENST00000622209 RNASE13Q5GAN3 156 aaKnown RBP13.7□□□□□ -0.22
PMPCA-212ENST00000622209 CD164L2Q6UWJ8 174 aa13.7□□□□□ -0.22
PMPCA-212ENST00000622209 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
PMPCA-212ENST00000622209 FAM104AQ969W3 186 aa13.7□□□□□ -0.22
PMPCA-212ENST00000622209 SMCO4Q9NRQ5 59 aa13.7□□□□□ -0.22
PMPCA-212ENST00000622209 C2orf66Q6UXQ4 117 aa13.68□□□□□ -0.22
PMPCA-212ENST00000622209 TRAV13-1A0A0B4J241 112 aa13.67□□□□□ -0.22
PMPCA-212ENST00000622209 hDV102S1A0JD36 115 aa13.67□□□□□ -0.22
PMPCA-212ENST00000622209 OPRPNQ99935 248 aaPredicted RBP13.67□□□□□ -0.22
PMPCA-212ENST00000622209 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
PMPCA-212ENST00000622209 NPSP0C0P6 89 aa13.66□□□□□ -0.22
PMPCA-212ENST00000622209 SCXQ7RTU7 201 aa13.66□□□□□ -0.22
PMPCA-212ENST00000622209 C15orf56Q8N910 161 aa13.66□□□□□ -0.22
PMPCA-212ENST00000622209 AP5S1Q9NUS5 200 aa13.66□□□□□ -0.22
PMPCA-212ENST00000622209 IGLV4-3A0A075B6K6 122 aa13.65□□□□□ -0.22
PMPCA-212ENST00000622209 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
PMPCA-212ENST00000622209 CNBPP62633 177 aaKnown RBP13.64□□□□□ -0.23
PMPCA-212ENST00000622209 CBLN2Q8IUK8 224 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms