RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 PLAC8L1A1L4L8 177 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 K7EQD1 137 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
PDPN-212ENST00000621990 ETDBQ3ZM63 59 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 ZFAND6Q6FIF0 208 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 Q6ZTI0 123 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 SH2D6Q7Z4S9 175 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 ARL17AQ8IVW1 177 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 ATP6V0E2Q8NHE4 81 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 YAE1D1Q9NRH1 226 aa6.75□□□□□ -1.33
PDPN-212ENST00000621990 KMT2BQ9UMN6 2715 aaPredicted RBP6.74□□□□□ -1.33
PDPN-212ENST00000621990 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.74□□□□□ -1.33
PDPN-212ENST00000621990 NDUFA7O95182 113 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 IGHV3-33P01772 117 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 SBSPONQ8IVN8 264 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 HILS1P60008 231 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 RNF183Q96D59 192 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 NDUFA12Q9UI09 145 aa6.74□□□□□ -1.33
PDPN-212ENST00000621990 WNK1Q9H4A3 2382 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 J3QR89 54 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 TIMM17BO60830 172 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 TCL1BO95988 128 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 PSMB2P49721 201 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 RPL36AP83881 106 aaKnown RBP6.73□□□□□ -1.33
PDPN-212ENST00000621990 CSNK1G2-AS1Q8NCQ2 148 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 RPL36ALQ969Q0 106 aaKnown RBP6.73□□□□□ -1.33
PDPN-212ENST00000621990 C16orf74Q96GX8 76 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 NTM-AS1Q6ZSK4 140 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 MTURNQ8N3F0 131 aa6.73□□□□□ -1.33
PDPN-212ENST00000621990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.73□□□□□ -1.33
PDPN-212ENST00000621990 GEMIN7Q9H840 131 aaKnown RBP6.73□□□□□ -1.33
PDPN-212ENST00000621990 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 SPINK8P0C7L1 97 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 MIAQ16674 131 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 C1QTNF4Q9BXJ3 329 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 UNC79Q9P2D8 2635 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 NDUFA1O15239 70 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 HERVK_113P63121 156 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 LINC00242Q5T6M2 205 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
PDPN-212ENST00000621990 M0QXV9 152 aa6.71□□□□□ -1.33
PDPN-212ENST00000621990 SPATA25Q9BR10 227 aa6.71□□□□□ -1.33
PDPN-212ENST00000621990 NOP10Q9NPE3 64 aaKnown RBP6.71□□□□□ -1.33
PDPN-212ENST00000621990 ERG28Q9UKR5 140 aa6.71□□□□□ -1.33
PDPN-212ENST00000621990 A8MZ25 164 aa6.71□□□□□ -1.34
PDPN-212ENST00000621990 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
PDPN-212ENST00000621990 DGAT2L7PQ6IED9 249 aa6.71□□□□□ -1.34
PDPN-212ENST00000621990 ZNF418Q8TF45 676 aaPredicted RBP6.71□□□□□ -1.34
PDPN-212ENST00000621990 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
PDPN-212ENST00000621990 ACANP16112 2415 aa6.71□□□□□ -1.34
PDPN-212ENST00000621990 J3QKU1 62 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 COX6A2Q02221 97 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 WFDC10AQ9H1F0 79 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 TRBV6-4A0A1B0GX49 114 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 INSL3P51460 131 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 FOXI1Q12951 378 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 SETD2Q9BYW2 2564 aaPredicted RBP6.7□□□□□ -1.34
PDPN-212ENST00000621990 HELZ2Q9BYK8 2649 aaKnown RBP6.7□□□□□ -1.34
PDPN-212ENST00000621990 MTORP42345 2549 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 JMJD1CQ15652 2540 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 TRBV30A0A0K0K1B3 111 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 LINC01600Q96MT4 127 aa6.7□□□□□ -1.34
PDPN-212ENST00000621990 H7C423 109 aa6.69□□□□□ -1.34
PDPN-212ENST00000621990 IFITM1P13164 125 aa6.69□□□□□ -1.34
PDPN-212ENST00000621990 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
PDPN-212ENST00000621990 TEN1Q86WV5 123 aa6.69□□□□□ -1.34
PDPN-212ENST00000621990 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 SMIM1B2RUZ4 78 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
PDPN-212ENST00000621990 GAGE4Q13068 117 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 GAGE5Q13069 117 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 F5H768 121 aa6.68□□□□□ -1.34
PDPN-212ENST00000621990 GAGE7O76087 117 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 PRSS2P07478 247 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 GAGE12FP0CL80 117 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 GAGE12GP0CL81 117 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 GAGE12IP0CL82 117 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 TMEM243Q9BU79 118 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 TRGV2A0A075B6R0 118 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 KRTAP10-3P60369 221 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 PPDPFLQ8WWR9 84 aa6.67□□□□□ -1.34
PDPN-212ENST00000621990 ZNF625Q96I27 306 aaPredicted RBP6.67□□□□□ -1.34
PDPN-212ENST00000621990 TRIAP1O43715 76 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 SIGMAR1Q99720 223 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 PPDPFQ9H3Y8 114 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 FHL2Q14192 279 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
PDPN-212ENST00000621990 LINC00612Q8N6U2 182 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms