RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FGF6P10767 208 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 APOC4P55056 127 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 MTURNQ8N3F0 131 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 VSIG2Q96IQ7 327 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 GEMIN7Q9H840 131 aaKnown RBP7.44□□□□□ -1.22
VPS11-208ENST00000621676 CCL25O15444 150 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 SRSF9Q13242 221 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS11-208ENST00000621676 FHL2Q14192 279 aa7.44□□□□□ -1.22
VPS11-208ENST00000621676 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 INSL3P51460 131 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 A0A087WX48 190 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 PLEKHB2Q96CS7 222 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
VPS11-208ENST00000621676 IGLV4-3A0A075B6K6 122 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 F8VRH5 84 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 RS1O15537 224 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 COX6A2Q02221 97 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 NXPH4O95158 308 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 APOMO95445 188 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 MED14OSP0DP75 135 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 PMVKQ15126 192 aa7.42□□□□□ -1.22
VPS11-208ENST00000621676 IGIPA6NJ69 53 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 LGALS9BQ3B8N2 356 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 LGALS9CQ6DKI2 356 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 ANGP03950 147 aaKnown RBP7.41□□□□□ -1.22
VPS11-208ENST00000621676 WFDC9Q8NEX5 89 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
VPS11-208ENST00000621676 TRAV4A0A0B4J268 109 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 TSPEAR-AS2P59090 65 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 Q9HAA7 133 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
VPS11-208ENST00000621676 RHODO00212 210 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 PPP1R17O96001 155 aa7.4□□□□□ -1.22
VPS11-208ENST00000621676 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.22
VPS11-208ENST00000621676 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.22
VPS11-208ENST00000621676 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.22
VPS11-208ENST00000621676 RBX1P62877 108 aa7.4□□□□□ -1.23
VPS11-208ENST00000621676 OR5A1Q8NGJ0 315 aa7.4□□□□□ -1.23
VPS11-208ENST00000621676 ORAOV1Q8WV07 137 aa7.4□□□□□ -1.23
VPS11-208ENST00000621676 TMEM141Q96I45 108 aa7.4□□□□□ -1.23
VPS11-208ENST00000621676 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.23
VPS11-208ENST00000621676 CMC4P56277 68 aaPredicted RBP7.39□□□□□ -1.23
VPS11-208ENST00000621676 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
VPS11-208ENST00000621676 IGLL5B9A064 214 aa7.39□□□□□ -1.23
VPS11-208ENST00000621676 SPART-AS1P0CW21 52 aa7.39□□□□□ -1.23
VPS11-208ENST00000621676 VAMP3Q15836 100 aa7.39□□□□□ -1.23
VPS11-208ENST00000621676 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
VPS11-208ENST00000621676 UFSP1Q6NVU6 142 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 FXYD2P54710 66 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 UBE2V1Q13404 147 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 RHOHQ15669 191 aa7.38□□□□□ -1.23
VPS11-208ENST00000621676 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 ATP5G1P05496 136 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 COX8AP10176 69 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
VPS11-208ENST00000621676 UBE2D4Q9Y2X8 147 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 COX11Q9Y6N1 276 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 K7EIL1 84 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 PFN2P35080 140 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 TMEM97Q5BJF2 176 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 Q8NAQ8 132 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 MEGF8Q7Z7M0 2845 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 A8MTW9 85 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 LECT2O14960 151 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 C2orf91Q6ZV80 131 aa7.37□□□□□ -1.23
VPS11-208ENST00000621676 MRPS16Q9Y3D3 137 aaKnown RBP7.37□□□□□ -1.23
VPS11-208ENST00000621676 UBE2D3P61077 147 aa7.36□□□□□ -1.23
VPS11-208ENST00000621676 UBE2D2P62837 147 aa7.36□□□□□ -1.23
VPS11-208ENST00000621676 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
VPS11-208ENST00000621676 UBE2WQ96B02 151 aa7.36□□□□□ -1.23
VPS11-208ENST00000621676 H3BUT2 72 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 CRYBA4P53673 196 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 RNF183Q96D59 192 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 TMEM101Q96IK0 257 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 LYSTQ99698 3801 aa7.35□□□□□ -1.23
VPS11-208ENST00000621676 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 ZNF22P17026 224 aaPredicted RBP7.34□□□□□ -1.23
VPS11-208ENST00000621676 C2orf82Q6UX34 121 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 PLNP26678 52 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 FAM104AQ969W3 186 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
VPS11-208ENST00000621676 J3QQQ9 107 aa7.34□□□□□ -1.24
VPS11-208ENST00000621676 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.24
VPS11-208ENST00000621676 BVES-AS1Q5T3Y7 98 aa7.34□□□□□ -1.24
VPS11-208ENST00000621676 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
VPS11-208ENST00000621676 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
VPS11-208ENST00000621676 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
VPS11-208ENST00000621676 ZMAT4Q9H898 229 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms