RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CREBBPQ92793 2442 aa14.08□□□□□ -0.15
PDLIM3-212ENST00000620787 DGAT2L7PQ6IED9 249 aa14.08□□□□□ -0.16
PDLIM3-212ENST00000620787 HERVK_113P63121 156 aa14.08□□□□□ -0.16
PDLIM3-212ENST00000620787 SOSTDC1Q6X4U4 206 aa14.08□□□□□ -0.16
PDLIM3-212ENST00000620787 ZNF625Q96I27 306 aaPredicted RBP14.08□□□□□ -0.16
PDLIM3-212ENST00000620787 PRORYQ9H606 182 aa14.08□□□□□ -0.16
PDLIM3-212ENST00000620787 COX7A2LO14548 114 aa14.07□□□□□ -0.16
PDLIM3-212ENST00000620787 LINC01356Q8N9X3 169 aa14.07□□□□□ -0.16
PDLIM3-212ENST00000620787 MAP6D1Q9H9H5 199 aa14.07□□□□□ -0.16
PDLIM3-212ENST00000620787 TRBV7-7A0A0K0K1E9 115 aa14.07□□□□□ -0.16
PDLIM3-212ENST00000620787 A0A0U1RRA0 63 aa14.06□□□□□ -0.16
PDLIM3-212ENST00000620787 SMIM1B2RUZ4 78 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 SHISA2Q6UWI4 295 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 FAM19A3Q7Z5A8 133 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 LINC00694P0DN24 101 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 Q8N2B8 174 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 NRGNQ92686 78 aa14.05□□□□□ -0.16
PDLIM3-212ENST00000620787 NDUFA7O95182 113 aa14.04□□□□□ -0.16
PDLIM3-212ENST00000620787 INSP01308 110 aa14.04□□□□□ -0.16
PDLIM3-212ENST00000620787 DSCR9P59020 149 aa14.03□□□□□ -0.16
PDLIM3-212ENST00000620787 A0A096LNT2 108 aa14.02□□□□□ -0.16
PDLIM3-212ENST00000620787 Q6YL49 198 aa14.02□□□□□ -0.16
PDLIM3-212ENST00000620787 J3QLI3 93 aa14.02□□□□□ -0.17
PDLIM3-212ENST00000620787 COPS9Q8WXC6 57 aa14.01□□□□□ -0.17
PDLIM3-212ENST00000620787 ACYP1P07311 99 aa14.01□□□□□ -0.17
PDLIM3-212ENST00000620787 MAPK1IP1LQ8NDC0 245 aa14.01□□□□□ -0.17
PDLIM3-212ENST00000620787 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
PDLIM3-212ENST00000620787 ZANQ9Y493 2812 aa14□□□□□ -0.17
PDLIM3-212ENST00000620787 PEMTQ9UBM1 199 aa14□□□□□ -0.17
PDLIM3-212ENST00000620787 TRAV13-1A0A0B4J241 112 aa14□□□□□ -0.17
PDLIM3-212ENST00000620787 F5H768 121 aa14□□□□□ -0.17
PDLIM3-212ENST00000620787 PRIMA1Q86XR5 153 aa14□□□□□ -0.17
PDLIM3-212ENST00000620787 CSDC2Q9Y534 153 aaKnown RBP14□□□□□ -0.17
PDLIM3-212ENST00000620787 NTM-AS1Q6ZSK4 140 aa13.99□□□□□ -0.17
PDLIM3-212ENST00000620787 TRACP01848 142 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 MEIG1Q5JSS6 88 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 IL17DQ8TAD2 202 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 SMCR5Q8TEV8 140 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 MXRA5Q9NR99 2828 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 FSHBP01225 129 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 CSMD2Q7Z408 3487 aa13.98□□□□□ -0.17
PDLIM3-212ENST00000620787 DYNLRB2Q8TF09 96 aa13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 XCL2Q9UBD3 114 aa13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 C22orf24Q9Y442 160 aa13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 DAZ2Q13117 558 aaKnown RBP13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 DAZ4Q86SG3 579 aaKnown RBP13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 DAZ3Q9NR90 486 aaKnown RBP13.97□□□□□ -0.17
PDLIM3-212ENST00000620787 DEFB114Q30KQ6 69 aa13.96□□□□□ -0.17
PDLIM3-212ENST00000620787 FAM218AQ96MZ4 157 aa13.96□□□□□ -0.17
PDLIM3-212ENST00000620787 TRGV1A0A0A0MS02 117 aa13.96□□□□□ -0.18
PDLIM3-212ENST00000620787 IMUPQ9GZP8 106 aa13.96□□□□□ -0.18
PDLIM3-212ENST00000620787 FLNCQ14315 2725 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 C1orf158Q8N1D5 194 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 CDC42SE2Q9NRR3 84 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 DOPEY1Q5JWR5 2465 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 K7EQD1 137 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 BAALC-AS2P0C853 105 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 HERV-K104P63124 156 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 RPL36AP83881 106 aaKnown RBP13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 C4orf3Q8WVX3 66 aa13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 RPL36ALQ969Q0 106 aaKnown RBP13.95□□□□□ -0.18
PDLIM3-212ENST00000620787 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
PDLIM3-212ENST00000620787 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
PDLIM3-212ENST00000620787 UTP20O75691 2785 aaKnown RBP13.94□□□□□ -0.18
PDLIM3-212ENST00000620787 SDIM1Q6ZPB5 146 aa13.94□□□□□ -0.18
PDLIM3-212ENST00000620787 Q96MF0 132 aa13.94□□□□□ -0.18
PDLIM3-212ENST00000620787 TRBV10-1A0A0K0K1A3 114 aa13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 FAM236AA0A1B0GUQ0 79 aa13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 FAM236BA0A1B0GV22 79 aa13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 USP9YO00507 2555 aaPredicted RBP13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 ODF3L2Q3SX64 289 aa13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 LINC00643Q86TS7 51 aa13.93□□□□□ -0.18
PDLIM3-212ENST00000620787 ANKRD17O75179 2603 aaKnown RBP13.92□□□□□ -0.18
PDLIM3-212ENST00000620787 USP9XQ93008 2570 aaPredicted RBP13.92□□□□□ -0.18
PDLIM3-212ENST00000620787 HIST2H2BDQ6DRA6 164 aa13.91□□□□□ -0.18
PDLIM3-212ENST00000620787 KHDC1LQ5JSQ8 128 aa13.91□□□□□ -0.18
PDLIM3-212ENST00000620787 FAM222AQ5U5X8 452 aa13.91□□□□□ -0.18
PDLIM3-212ENST00000620787 Q6ZTI0 123 aa13.91□□□□□ -0.18
PDLIM3-212ENST00000620787 CR1P17927 2039 aa13.9□□□□□ -0.18
PDLIM3-212ENST00000620787 SMIM20Q8N5G0 67 aa13.9□□□□□ -0.18
PDLIM3-212ENST00000620787 HIST2H2BCQ6DN03 193 aa13.89□□□□□ -0.19
PDLIM3-212ENST00000620787 PKD1L2Q7Z442 2459 aa13.89□□□□□ -0.19
PDLIM3-212ENST00000620787 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
PDLIM3-212ENST00000620787 STHQ8IWL8 128 aa13.88□□□□□ -0.19
PDLIM3-212ENST00000620787 RPL28P46779 137 aaKnown RBP13.88□□□□□ -0.19
PDLIM3-212ENST00000620787 PF4P02776 101 aa13.87□□□□□ -0.19
PDLIM3-212ENST00000620787 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
PDLIM3-212ENST00000620787 IGHV4-31P0DP07 118 aa13.87□□□□□ -0.19
PDLIM3-212ENST00000620787 LINC00337Q8N6G1 96 aa13.87□□□□□ -0.19
PDLIM3-212ENST00000620787 Q9HAA7 133 aa13.87□□□□□ -0.19
PDLIM3-212ENST00000620787 C3orf56Q8N813 242 aa13.86□□□□□ -0.19
PDLIM3-212ENST00000620787 PIEZO1Q92508 2521 aa13.86□□□□□ -0.19
PDLIM3-212ENST00000620787 IGKV2-28A0A075B6P5 120 aa13.86□□□□□ -0.19
PDLIM3-212ENST00000620787 IGKV2D-28P01615 120 aa13.86□□□□□ -0.19
PDLIM3-212ENST00000620787 TMEM243Q9BU79 118 aa13.86□□□□□ -0.19
PDLIM3-212ENST00000620787 CRPP02741 224 aa13.85□□□□□ -0.19
PDLIM3-212ENST00000620787 INAFM2P0DMQ5 153 aa13.85□□□□□ -0.19
PDLIM3-212ENST00000620787 UBE2L6O14933 153 aa13.85□□□□□ -0.19
PDLIM3-212ENST00000620787 MALP21145 153 aa13.85□□□□□ -0.19
PDLIM3-212ENST00000620787 MIR7-3HGQ8N6C7 128 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms