RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 YAE1D1Q9NRH1 226 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 RNASE13Q5GAN3 156 aaKnown RBP9.41□□□□□ -0.9
SKP2-209ENST00000620197 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 GAGE12JA6NER3 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 GAGE7O76087 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 ZNF415Q09FC8 603 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 GAGE4Q13068 117 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 CSDC2Q9Y534 153 aaKnown RBP9.4□□□□□ -0.9
SKP2-209ENST00000620197 ZANQ9Y493 2812 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 WNK1Q9H4A3 2382 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 COX6A2Q02221 97 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 CLEC2BQ92478 149 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
SKP2-209ENST00000620197 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
SKP2-209ENST00000620197 IGHV3OR16-12A0A075B7B8 117 aa9.39□□□□□ -0.91
SKP2-209ENST00000620197 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
SKP2-209ENST00000620197 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
SKP2-209ENST00000620197 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
SKP2-209ENST00000620197 FLNCQ14315 2725 aa9.39□□□□□ -0.91
SKP2-209ENST00000620197 USP9XQ93008 2570 aaPredicted RBP9.39□□□□□ -0.91
SKP2-209ENST00000620197 DUX5Q96PT3 197 aa9.39□□□□□ -0.91
SKP2-209ENST00000620197 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
SKP2-209ENST00000620197 DEFB131AP59861 70 aa9.38□□□□□ -0.91
SKP2-209ENST00000620197 C18orf65Q6ZTR6 163 aa9.38□□□□□ -0.91
SKP2-209ENST00000620197 MAP6D1Q9H9H5 199 aa9.38□□□□□ -0.91
SKP2-209ENST00000620197 F5H768 121 aa9.38□□□□□ -0.91
SKP2-209ENST00000620197 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
SKP2-209ENST00000620197 ZNF625Q96I27 306 aaPredicted RBP9.38□□□□□ -0.91
SKP2-209ENST00000620197 SONP18583 2426 aaKnown RBP9.38□□□□□ -0.91
SKP2-209ENST00000620197 SLURP1P55000 103 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 TRBV7-7A0A0K0K1E9 115 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 PRSS2P07478 247 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 TTC32Q5I0X7 151 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 SOSTDC1Q6X4U4 206 aa9.37□□□□□ -0.91
SKP2-209ENST00000620197 ACACBO00763 2458 aa9.36□□□□□ -0.91
SKP2-209ENST00000620197 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
SKP2-209ENST00000620197 ZFYVE26Q68DK2 2539 aa9.36□□□□□ -0.91
SKP2-209ENST00000620197 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
SKP2-209ENST00000620197 NPC2P61916 151 aa9.35□□□□□ -0.91
SKP2-209ENST00000620197 C4orf3Q8WVX3 66 aa9.35□□□□□ -0.91
SKP2-209ENST00000620197 COX6CP09669 75 aa9.34□□□□□ -0.91
SKP2-209ENST00000620197 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
SKP2-209ENST00000620197 HERVK_113P63121 156 aa9.34□□□□□ -0.91
SKP2-209ENST00000620197 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
SKP2-209ENST00000620197 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
SKP2-209ENST00000620197 COX7A2LO14548 114 aa9.33□□□□□ -0.92
SKP2-209ENST00000620197 DAND5Q8N907 189 aa9.33□□□□□ -0.92
SKP2-209ENST00000620197 MYO18BQ8IUG5 2567 aa9.33□□□□□ -0.92
SKP2-209ENST00000620197 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
SKP2-209ENST00000620197 DEFB114Q30KQ6 69 aa9.33□□□□□ -0.92
SKP2-209ENST00000620197 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
SKP2-209ENST00000620197 INSP01308 110 aa9.32□□□□□ -0.92
SKP2-209ENST00000620197 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
SKP2-209ENST00000620197 FAM110AQ9BQ89 295 aa9.32□□□□□ -0.92
SKP2-209ENST00000620197 NRGNQ92686 78 aa9.32□□□□□ -0.92
SKP2-209ENST00000620197 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
SKP2-209ENST00000620197 PEMTQ9UBM1 199 aa9.31□□□□□ -0.92
SKP2-209ENST00000620197 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 IGHV4-31P0DP07 118 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 Q9H8V8 135 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 IGSF10Q6WRI0 2623 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 HTN1P15515 57 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 CHCHD5Q9BSY4 110 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 CCDC168Q8NDH2 2452 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 LINC01587Q99440 93 aa9.3□□□□□ -0.92
SKP2-209ENST00000620197 TRACP01848 142 aa9.29□□□□□ -0.92
SKP2-209ENST00000620197 ACYP1P07311 99 aa9.29□□□□□ -0.92
SKP2-209ENST00000620197 Q96MF0 132 aa9.29□□□□□ -0.92
SKP2-209ENST00000620197 UBR5O95071 2799 aaPredicted RBP9.29□□□□□ -0.92
SKP2-209ENST00000620197 NDUFA7O95182 113 aa9.29□□□□□ -0.92
SKP2-209ENST00000620197 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
SKP2-209ENST00000620197 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
SKP2-209ENST00000620197 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
SKP2-209ENST00000620197 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
SKP2-209ENST00000620197 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
SKP2-209ENST00000620197 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
SKP2-209ENST00000620197 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
SKP2-209ENST00000620197 HERV-K104P63124 156 aa9.27□□□□□ -0.92
SKP2-209ENST00000620197 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.92
SKP2-209ENST00000620197 K7EQD1 137 aa9.27□□□□□ -0.93
SKP2-209ENST00000620197 SMIM20Q8N5G0 67 aa9.27□□□□□ -0.93
SKP2-209ENST00000620197 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
SKP2-209ENST00000620197 FAM218AQ96MZ4 157 aa9.27□□□□□ -0.93
SKP2-209ENST00000620197 TRAV25A0A0B4J276 109 aa9.27□□□□□ -0.93
SKP2-209ENST00000620197 ABCA12Q86UK0 2595 aa9.26□□□□□ -0.93
SKP2-209ENST00000620197 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
SKP2-209ENST00000620197 PKD1L2Q7Z442 2459 aa9.26□□□□□ -0.93
SKP2-209ENST00000620197 JMJD1CQ15652 2540 aa9.25□□□□□ -0.93
SKP2-209ENST00000620197 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
SKP2-209ENST00000620197 ANKRD17O75179 2603 aaKnown RBP9.25□□□□□ -0.93
SKP2-209ENST00000620197 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
SKP2-209ENST00000620197 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms