RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
TARDBP-221ENST00000619555 IGLV4-60A0A075B6I1 120 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 D6R8Y8 96 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 I3L3M4 83 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 AMTP48728 403 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 C20orf203Q8NBC4 194 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
TARDBP-221ENST00000619555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 IGKV2-29A2NJV5 120 aaPredicted RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 PANO1I0J062 215 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 OXTP01178 125 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 NPYP01303 97 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 S100A8P05109 93 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 PMCHP20382 165 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 CKS2P33552 79 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 SUMO2P61956 95 aaKnown RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 BTF3L4Q96K17 158 aa7.18□□□□□ -1.26
TARDBP-221ENST00000619555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
TARDBP-221ENST00000619555 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 A6NJY4 79 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 APOC3P02656 99 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 APCSP02743 223 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 ESDP10768 282 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 RHEBQ15382 184 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 TMEM136Q6ZRR5 245 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 SLC7A5P1Q8MH63 180 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 RPS10P5Q9NQ39 176 aa7.17□□□□□ -1.26
TARDBP-221ENST00000619555 A0A1B0GUV1 79 aa7.16□□□□□ -1.26
TARDBP-221ENST00000619555 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
TARDBP-221ENST00000619555 VCYO14598 125 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 UBE2L6O14933 153 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 PPP1R17O96001 155 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 REG3AQ06141 175 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 C20orf78Q9BR46 151 aa7.15□□□□□ -1.26
TARDBP-221ENST00000619555 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
TARDBP-221ENST00000619555 PPBPP02775 128 aa7.14□□□□□ -1.27
TARDBP-221ENST00000619555 FGF6P10767 208 aa7.14□□□□□ -1.27
TARDBP-221ENST00000619555 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
TARDBP-221ENST00000619555 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
TARDBP-221ENST00000619555 SMIM2Q9BVW6 85 aa7.14□□□□□ -1.27
TARDBP-221ENST00000619555 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
TARDBP-221ENST00000619555 PHOX2AO14813 284 aa7.13□□□□□ -1.27
TARDBP-221ENST00000619555 SLPIP03973 132 aa7.13□□□□□ -1.27
TARDBP-221ENST00000619555 SVBPQ8N300 66 aa7.13□□□□□ -1.27
TARDBP-221ENST00000619555 TNXBP22105 4242 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 TRAV8-4A0A0B4J246 113 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 H7C423 109 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 TCAPO15273 167 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 SNAPINO95295 136 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 S100PP25815 95 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
TARDBP-221ENST00000619555 KIAA1644Q3SXP7 199 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 RNASEKQ6P5S7 137 aaKnown RBP7.12□□□□□ -1.27
TARDBP-221ENST00000619555 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
TARDBP-221ENST00000619555 LOC389332A0A1B0GUA5 103 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 PRSS47A8MTI9 375 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 FCER1GP30273 86 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
TARDBP-221ENST00000619555 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 MRPL52Q86TS9 123 aaKnown RBP7.11□□□□□ -1.27
TARDBP-221ENST00000619555 DPH3Q96FX2 82 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 UBE2D4Q9Y2X8 147 aa7.11□□□□□ -1.27
TARDBP-221ENST00000619555 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 IGKV3OR2-268A0A0C4DH90 116 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
TARDBP-221ENST00000619555 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
TARDBP-221ENST00000619555 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 GNB1LQ9BYB4 327 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 AP5S1Q9NUS5 200 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 LAMTOR2Q9Y2Q5 125 aa7.1□□□□□ -1.27
TARDBP-221ENST00000619555 A0A087WYN8 130 aa7.09□□□□□ -1.27
TARDBP-221ENST00000619555 GAGE12HA6NDE8 117 aa7.09□□□□□ -1.27
TARDBP-221ENST00000619555 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.27
TARDBP-221ENST00000619555 CDC42SE2Q9NRR3 84 aa7.09□□□□□ -1.27
TARDBP-221ENST00000619555 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.08□□□□□ -1.28
TARDBP-221ENST00000619555 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
TARDBP-221ENST00000619555 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
TARDBP-221ENST00000619555 Q6ZUT4 128 aa7.08□□□□□ -1.28
TARDBP-221ENST00000619555 Q8N8P6 123 aa7.08□□□□□ -1.28
TARDBP-221ENST00000619555 C15orf56Q8N910 161 aa7.08□□□□□ -1.28
TARDBP-221ENST00000619555 OR5A1Q8NGJ0 315 aa7.08□□□□□ -1.28
TARDBP-221ENST00000619555 MRPL18Q9H0U6 180 aaKnown RBP7.08□□□□□ -1.28
TARDBP-221ENST00000619555 IFI27P40305 119 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-221ENST00000619555 CBLN2Q8IUK8 224 aa7.07□□□□□ -1.28
TARDBP-221ENST00000619555 ZNF664Q8N3J9 261 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms