RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 IGHV3-38A0A0C4DH36 116 aa11.19□□□□□ -0.62
GPN1-212ENST00000616939 B4DSR2 109 aa11.19□□□□□ -0.62
GPN1-212ENST00000616939 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
GPN1-212ENST00000616939 IGHV4-30-2A0A087WSY4 118 aa11.18□□□□□ -0.62
GPN1-212ENST00000616939 F5H768 121 aa11.18□□□□□ -0.62
GPN1-212ENST00000616939 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
GPN1-212ENST00000616939 Q8N2B8 174 aa11.18□□□□□ -0.62
GPN1-212ENST00000616939 LAMA5O15230 3695 aa11.17□□□□□ -0.62
GPN1-212ENST00000616939 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
GPN1-212ENST00000616939 AVPP01185 164 aa11.17□□□□□ -0.62
GPN1-212ENST00000616939 INSP01308 110 aa11.17□□□□□ -0.62
GPN1-212ENST00000616939 HTN1P15515 57 aa11.17□□□□□ -0.62
GPN1-212ENST00000616939 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 NDUFA7O95182 113 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
GPN1-212ENST00000616939 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 C9orf153Q5TBE3 101 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 PRIMA1Q86XR5 153 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 HIVEP3Q5T1R4 2406 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 SPTA1P02549 2419 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 HIST2H2BCQ6DN03 193 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
GPN1-212ENST00000616939 MALP21145 153 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 FAM218AQ96MZ4 157 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 COX7CP15954 63 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 ATP5J2P56134 94 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
GPN1-212ENST00000616939 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
GPN1-212ENST00000616939 A0A1B0GX51 115 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 J3QLI3 93 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 ATOX1O00244 68 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 CRPP02741 224 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 DSCR9P59020 149 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
GPN1-212ENST00000616939 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
GPN1-212ENST00000616939 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 SPTAN1Q13813 2472 aaKnown RBP11.12□□□□□ -0.63
GPN1-212ENST00000616939 PRM2P04554 102 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
GPN1-212ENST00000616939 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
GPN1-212ENST00000616939 K7EQD1 137 aa11.11□□□□□ -0.63
GPN1-212ENST00000616939 CRYGAP11844 174 aa11.11□□□□□ -0.63
GPN1-212ENST00000616939 OBSCN-AS1Q96MR7 158 aa11.11□□□□□ -0.63
GPN1-212ENST00000616939 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
GPN1-212ENST00000616939 LRRC75A-AS1Q8N1F1 130 aa11.1□□□□□ -0.63
GPN1-212ENST00000616939 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
GPN1-212ENST00000616939 H0YGX0 51 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 SLURP1P55000 103 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 Q6JHZ5 121 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 NRGNQ92686 78 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
GPN1-212ENST00000616939 LINC01356Q8N9X3 169 aa11.08□□□□□ -0.64
GPN1-212ENST00000616939 SORL1Q92673 2214 aa11.08□□□□□ -0.64
GPN1-212ENST00000616939 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.643e-6■■■■□ 21.2
GPN1-212ENST00000616939 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
GPN1-212ENST00000616939 NBASA2RRP1 2371 aa11.07□□□□□ -0.64
GPN1-212ENST00000616939 LINC00337Q8N6G1 96 aa11.07□□□□□ -0.64
GPN1-212ENST00000616939 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
GPN1-212ENST00000616939 Q96MF0 132 aa11.07□□□□□ -0.64
GPN1-212ENST00000616939 IGKV2-28A0A075B6P5 120 aa11.06□□□□□ -0.64
GPN1-212ENST00000616939 DNAL4O96015 105 aa11.06□□□□□ -0.64
GPN1-212ENST00000616939 FSHBP01225 129 aa11.06□□□□□ -0.64
GPN1-212ENST00000616939 IGKV2D-28P01615 120 aa11.06□□□□□ -0.64
GPN1-212ENST00000616939 J3KT08 172 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 GNLYP22749 145 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 Q6YL49 198 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 RPS28P62857 69 aaKnown RBP11.05□□□□□ -0.64
GPN1-212ENST00000616939 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
GPN1-212ENST00000616939 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 DYNLRB2Q8TF09 96 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 C4orf3Q8WVX3 66 aa11.05□□□□□ -0.64
GPN1-212ENST00000616939 KLK5Q9Y337 293 aaPredicted RBP11.05□□□□□ -0.64
GPN1-212ENST00000616939 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
GPN1-212ENST00000616939 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
GPN1-212ENST00000616939 C1orf158Q8N1D5 194 aa11.04□□□□□ -0.64
GPN1-212ENST00000616939 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
GPN1-212ENST00000616939 Q9HAA7 133 aa11.04□□□□□ -0.64
GPN1-212ENST00000616939 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
GPN1-212ENST00000616939 SMIM11BQ8TCY0 68 aa11.03□□□□□ -0.64
GPN1-212ENST00000616939 MUC6Q6W4X9 2439 aa11.03□□□□□ -0.64
GPN1-212ENST00000616939 UBE2L6O14933 153 aa11.02□□□□□ -0.64
GPN1-212ENST00000616939 A0A096LNT2 108 aa11.02□□□□□ -0.65
GPN1-212ENST00000616939 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
GPN1-212ENST00000616939 C18orf65Q6ZTR6 163 aa11.02□□□□□ -0.65
GPN1-212ENST00000616939 CEP295Q9C0D2 2601 aa11.01□□□□□ -0.65
GPN1-212ENST00000616939 A0A087WYN8 130 aa11.01□□□□□ -0.65
GPN1-212ENST00000616939 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
GPN1-212ENST00000616939 LY6G6DO95868 133 aa11□□□□□ -0.65
GPN1-212ENST00000616939 CCL18P55774 89 aa11□□□□□ -0.65
GPN1-212ENST00000616939 ODF3L2Q3SX64 289 aa11□□□□□ -0.65
GPN1-212ENST00000616939 XCL2Q9UBD3 114 aa11□□□□□ -0.65
GPN1-212ENST00000616939 ATRXP46100 2492 aa10.99□□□□□ -0.65
GPN1-212ENST00000616939 Q6ZTI0 123 aa10.98□□□□□ -0.65
GPN1-212ENST00000616939 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms