RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
MMP28-206ENST00000616383 LINC01549A6NIU2 74 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 H7C423 109 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 FGF6P10767 208 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
MMP28-206ENST00000616383 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 TCTAP57738 103 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 ERASQ7Z444 233 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
MMP28-206ENST00000616383 WFDC10BQ8IUB3 73 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
MMP28-206ENST00000616383 RYR3Q15413 4870 aa7.51□□□□□ -1.21
MMP28-206ENST00000616383 IGIPA6NJ69 53 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 TMEM262E9PQX1 116 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 ATP5LO75964 103 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 CCL18P55774 89 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 MPV17L2Q567V2 206 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 Q6ZUT4 128 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 TMEM141Q96I45 108 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 TIMM17AQ99595 171 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
MMP28-206ENST00000616383 PYGO1Q9Y3Y4 419 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 LINC00588Q9Y4M8 146 aa7.5□□□□□ -1.21
MMP28-206ENST00000616383 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 IGLV4-3A0A075B6K6 122 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
MMP28-206ENST00000616383 ZNF25P17030 456 aaPredicted RBP7.49□□□□□ -1.21
MMP28-206ENST00000616383 PKIAP61925 76 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 DGAT2L7PQ6IED9 249 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 UBE2DNLQ8IWF7 75 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 Q8N976 141 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
MMP28-206ENST00000616383 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
MMP28-206ENST00000616383 KRTDAPP60985 99 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 RBX1P62877 108 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 RNASE13Q5GAN3 156 aaKnown RBP7.48□□□□□ -1.21
MMP28-206ENST00000616383 Q6ZN92 141 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 OR10D4PQ8NGN7 298 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 TMEM101Q96IK0 257 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 MAP1LC3CQ9BXW4 147 aa7.48□□□□□ -1.21
MMP28-206ENST00000616383 CSDC2Q9Y534 153 aaKnown RBP7.48□□□□□ -1.21
MMP28-206ENST00000616383 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 A0A087WX48 190 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 H0Y8G0 127 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 NPSP0C0P6 89 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 C3orf79P0CE67 100 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 MRPS36P82909 103 aaKnown RBP7.47□□□□□ -1.21
MMP28-206ENST00000616383 LCE5AQ5TCM9 118 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 ZC2HC1BQ5TFG8 222 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 BAALCQ8WXS3 180 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 UPK3BQ9BT76 320 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
MMP28-206ENST00000616383 A0A1B0GUV1 79 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 C3orf84H3BNL1 204 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 IGHV3-30P01768 117 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 PRSS1P07477 247 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 IGHV3-30-3P0DP02 117 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 PAPPA-AS1Q5QFB9 102 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 CASC10Q5T4H9 136 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 ZNF664Q8N3J9 261 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 CDC42SE2Q9NRR3 84 aa7.46□□□□□ -1.22
MMP28-206ENST00000616383 ALMS1Q8TCU4 4167 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 SIVA1O15304 175 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 DNAH10OSP0CZ25 163 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 AKR1D1P51857 326 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 PMVKQ15126 192 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 TEX43Q6ZNM6 134 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 SPATA12Q7Z6I5 190 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 AMELXQ99217 191 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 VCX2Q9H322 139 aa7.45□□□□□ -1.22
MMP28-206ENST00000616383 TRAV12-1A0A0B4J245 112 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 ANGP03950 147 aaKnown RBP7.44□□□□□ -1.22
MMP28-206ENST00000616383 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 C2orf88Q9BSF0 95 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 CST9LQ9H4G1 147 aa7.44□□□□□ -1.22
MMP28-206ENST00000616383 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
MMP28-206ENST00000616383 PRSS29PA6NIE9 313 aa7.43□□□□□ -1.22
MMP28-206ENST00000616383 ODF1Q14990 250 aa7.43□□□□□ -1.22
MMP28-206ENST00000616383 KLK12Q9UKR0 248 aa7.43□□□□□ -1.22
MMP28-206ENST00000616383 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
MMP28-206ENST00000616383 LINC01545Q5VT33 79 aa7.42□□□□□ -1.22
MMP28-206ENST00000616383 LINC00269Q8N2A0 174 aa7.42□□□□□ -1.22
MMP28-206ENST00000616383 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
MMP28-206ENST00000616383 Q9H8V8 135 aa7.42□□□□□ -1.22
MMP28-206ENST00000616383 CHTOPQ9Y3Y2 248 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms