RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
CDH5-208ENST00000614547 PAX4O43316 350 aa8.73□□□□□ -1.01
CDH5-208ENST00000614547 IGHV4-59P01825 116 aa8.72□□□□□ -1.01
CDH5-208ENST00000614547 POM121L12Q8N7R1 296 aa8.72□□□□□ -1.01
CDH5-208ENST00000614547 Q9UF83 564 aa8.72□□□□□ -1.01
CDH5-208ENST00000614547 VPS13CQ709C8 3753 aa8.72□□□□□ -1.01
CDH5-208ENST00000614547 CRPP02741 224 aa8.72□□□□□ -1.01
CDH5-208ENST00000614547 LMO4P61968 165 aa8.71□□□□□ -1.01
CDH5-208ENST00000614547 NDUFA7O95182 113 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 KLK5Q9Y337 293 aaPredicted RBP8.71□□□□□ -1.02
CDH5-208ENST00000614547 IGHV4OR15-8A0A075B7B6 117 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 A0A087WW49 117 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 MIAQ16674 131 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 U3KQE9 123 aa8.71□□□□□ -1.02
CDH5-208ENST00000614547 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
CDH5-208ENST00000614547 A0A0J9YX75 114 aa8.7□□□□□ -1.02
CDH5-208ENST00000614547 H3BT86 120 aa8.7□□□□□ -1.02
CDH5-208ENST00000614547 MED14OSP0DP75 135 aa8.7□□□□□ -1.02
CDH5-208ENST00000614547 ZNF415Q09FC8 603 aa8.7□□□□□ -1.02
CDH5-208ENST00000614547 BBC3Q96PG8 261 aaPredicted RBP8.7□□□□□ -1.02
CDH5-208ENST00000614547 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
CDH5-208ENST00000614547 ATP5G1P05496 136 aa8.69□□□□□ -1.02
CDH5-208ENST00000614547 LINC00315P59091 139 aa8.69□□□□□ -1.02
CDH5-208ENST00000614547 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
CDH5-208ENST00000614547 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
CDH5-208ENST00000614547 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
CDH5-208ENST00000614547 NHLRC4P0CG21 123 aaPredicted RBP8.69□□□□□ -1.02
CDH5-208ENST00000614547 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
CDH5-208ENST00000614547 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
CDH5-208ENST00000614547 SLURP1P55000 103 aa8.68□□□□□ -1.02
CDH5-208ENST00000614547 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
CDH5-208ENST00000614547 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
CDH5-208ENST00000614547 TMEM61Q8N0U2 210 aa8.67□□□□□ -1.02
CDH5-208ENST00000614547 KLLNB2CW77 178 aa8.67□□□□□ -1.02
CDH5-208ENST00000614547 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
CDH5-208ENST00000614547 UBR5O95071 2799 aaPredicted RBP8.67□□□□□ -1.02
CDH5-208ENST00000614547 RPL36AP83881 106 aaKnown RBP8.66□□□□□ -1.02
CDH5-208ENST00000614547 RPL36ALQ969Q0 106 aaKnown RBP8.66□□□□□ -1.02
CDH5-208ENST00000614547 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
CDH5-208ENST00000614547 COL27A1Q8IZC6 1860 aaPredicted RBP8.66□□□□□ -1.02
CDH5-208ENST00000614547 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
CDH5-208ENST00000614547 LST1O00453 97 aa8.66□□□□□ -1.02
CDH5-208ENST00000614547 IGHG2P01859 326 aa8.66□□□□□ -1.02
CDH5-208ENST00000614547 DEFB112Q30KQ8 113 aa8.66□□□□□ -1.02
CDH5-208ENST00000614547 CLPSL2Q6UWE3 100 aa8.66□□□□□ -1.02
CDH5-208ENST00000614547 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 STHQ8IWL8 128 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 LOC107984640A0A0U1RRK4 108 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 SOCS3O14543 225 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 C11orf71Q6IPW1 123 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
CDH5-208ENST00000614547 SLPIP03973 132 aa8.65□□□□□ -1.03
CDH5-208ENST00000614547 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.03
CDH5-208ENST00000614547 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.03
CDH5-208ENST00000614547 A0A1B0GX51 115 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 MSMBP08118 114 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 LINC00694P0DN24 101 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
CDH5-208ENST00000614547 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
CDH5-208ENST00000614547 Q6ZSN1 163 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 AMELXQ99217 191 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 SPANXA1Q9NS26 97 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 HERVK_113P63121 156 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 F8P00451 2351 aa8.63□□□□□ -1.03
CDH5-208ENST00000614547 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 SBSPONQ8IVN8 264 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 MIR7-3HGQ8N6C7 128 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 A0A096LPF7 62 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 M0QXV9 152 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 LECT2O14960 151 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 C6orf226Q5I0X4 101 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 C9orf85Q96MD7 179 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 NIPBLQ6KC79 2804 aaeCLIP8.62□□□□□ -1.03
CDH5-208ENST00000614547 COX6A2Q02221 97 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 UNC79Q9P2D8 2635 aa8.62□□□□□ -1.03
CDH5-208ENST00000614547 COX7A2LO14548 114 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 INSP01308 110 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 K7EQG2 157 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 Q8N2B8 174 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 PEMTQ9UBM1 199 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
CDH5-208ENST00000614547 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 PRORYQ9H606 182 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 A0A087WVE0 104 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 TIRAPP58753 221 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
CDH5-208ENST00000614547 TRACP01848 142 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
CDH5-208ENST00000614547 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms