RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 C1orf229Q6ZS94 237 aaPredicted RBP5.08□□□□□ -1.6
CLCN3-211ENST00000613795 C11orf45Q8TAV5 145 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 C2orf16Q68DN1 1984 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 C9orf85Q96MD7 179 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 CEP250Q9BV73 2442 aa5.08□□□□□ -1.6
CLCN3-211ENST00000613795 COX17Q14061 63 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 DEFB114Q30KQ6 69 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 LINC01546A6NGU7 62 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 SMCPP49901 116 aaPredicted RBP5.07□□□□□ -1.6
CLCN3-211ENST00000613795 POM121L12Q8N7R1 296 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 NACAE9PAV3 2078 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 WFDC10AQ9H1F0 79 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 MRGPRG-AS1Q2M3A8 158 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 UNQ9165/PRO28630Q6UXU0 137 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 Q6ZQY7 126 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
CLCN3-211ENST00000613795 PLAC8L1A1L4L8 177 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 GAS8-AS1O95177 125 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 RNASE3P12724 160 aaKnown RBP5.06□□□□□ -1.6
CLCN3-211ENST00000613795 MUC22E2RYF6 1773 aaPredicted RBP5.06□□□□□ -1.6
CLCN3-211ENST00000613795 DEFB1P60022 68 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 LINC01548A6NM66 108 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 DEFB135Q30KP9 77 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 TSPEAR-AS2P59090 65 aa5.06□□□□□ -1.6
CLCN3-211ENST00000613795 IGLV2-18A0A075B6J9 118 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 PTPRZ1P23471 2315 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-211ENST00000613795 Q8N3U1 123 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 C11orf21Q9P2W6 132 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 Q8N6K4 173 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 Q8N814 137 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 Q8N9L7 120 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 REG3AQ06141 175 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 LIMD2Q9BT23 127 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 WFDC10BQ8IUB3 73 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
CLCN3-211ENST00000613795 CXCL6P80162 114 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
CLCN3-211ENST00000613795 BRI3O95415 125 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 KLK12Q9UKR0 248 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 PSPHP1O15172 72 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 CD164L2Q6UWJ8 174 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 C10orf142B7Z368 130 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 C22orf34Q6ZV56 151 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 CHCHD10Q8WYQ3 142 aaPredicted RBP5.04□□□□□ -1.6
CLCN3-211ENST00000613795 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 KLLNB2CW77 178 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 C3orf84H3BNL1 204 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 PRR4Q16378 134 aa5.04□□□□□ -1.6
CLCN3-211ENST00000613795 NOTCH4Q99466 2003 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 ADAMTS9Q9P2N4 1935 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 CRYGDP07320 174 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 ARFGEF3Q5TH69 2177 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 A0A087WYN8 130 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 TRBV6-8A0A0A6YYG3 113 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 M0R378 163 aa5.03□□□□□ -1.6
CLCN3-211ENST00000613795 Q8IZM0 81 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 AMELXQ99217 191 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 FAM19A1Q7Z5A9 133 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 WNK2Q9Y3S1 2297 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 ADAMTSL4-AS1Q5T5F5 129 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 ZNF702PQ9H963 129 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 Q6ZSV7 163 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 LINC00269Q8N2A0 174 aa5.02□□□□□ -1.61
CLCN3-211ENST00000613795 ZNF318Q5VUA4 2279 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 PRR9Q5T870 116 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 hDV103S1A0JD37 113 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 LINC00474Q9P2X8 69 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 C19orf84I3L1E1 186 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 GTF3C1Q12789 2109 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 SMIM1B2RUZ4 78 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 ZNF73O43830 326 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-211ENST00000613795 LINC01547P58512 204 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-211ENST00000613795 Q6ZTI0 123 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 ZNF843Q8N446 348 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 CHCHD7Q9BUK0 85 aa5.01□□□□□ -1.61
CLCN3-211ENST00000613795 Q6ZVQ6 151 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 LELP1Q5T871 98 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 USF3Q68DE3 2245 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 CELA1Q9UNI1 258 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 WIPF1O43516 503 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 DCANP1Q8TF63 244 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 CDC42SE2Q9NRR3 84 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 DSCAML1Q8TD84 2053 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 C7orf33Q8WU49 177 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 ATG2AQ2TAZ0 1938 aa5□□□□□ -1.61
CLCN3-211ENST00000613795 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
CLCN3-211ENST00000613795 COL5A1P20908 1838 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-211ENST00000613795 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
CLCN3-211ENST00000613795 LINC00959A0A1B0GUT2 108 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms