RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IGKV1D-37A0A075B6S9 117 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 VWCEQ96DN2 955 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 CCDC140Q96MF4 163 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 WFDC10AQ9H1F0 79 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 PRB4P10163 310 aaPredicted RBP6.64□□□□□ -1.35
TTC28-208ENST00000612946 LTBP2Q14767 1821 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 HHLA3Q9XRX5 114 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 TRBV7-6A0A0J9YX20 115 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 E7EQL1 145 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 FSTL3O95633 263 aa6.64□□□□□ -1.35
TTC28-208ENST00000612946 ZNF295-AS1Q8N0V1 137 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 USP24Q9UPU5 2620 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 LINC00310P59036 64 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 EPOPA6NHQ4 379 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 MRGPRG-AS1Q2M3A8 158 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 POLQO75417 2590 aa6.63□□□□□ -1.35
TTC28-208ENST00000612946 FASNP49327 2511 aaKnown RBP6.62□□□□□ -1.35
TTC28-208ENST00000612946 hDV103S1A0JD37 113 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 LYNX1G3V0Z9 82 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 M0QY20 66 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 IGLV2-11P01706 119 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 LYNX1P0DP58 116 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
TTC28-208ENST00000612946 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
TTC28-208ENST00000612946 EBI3Q14213 229 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 CELA1Q9UNI1 258 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 SEM1Q6ZVN7 128 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 ODF3L1Q8IXM7 274 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 FLG2Q5D862 2391 aaPredicted RBP6.61□□□□□ -1.35
TTC28-208ENST00000612946 CGB3P0DN86 165 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 LINC01546A6NGU7 62 aa6.61□□□□□ -1.35
TTC28-208ENST00000612946 LINC00322Q6ZN03 302 aaPredicted RBP6.6□□□□□ -1.35
TTC28-208ENST00000612946 Q6ZQT7 251 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 PRSS33Q8NF86 280 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 ZNRD1Q9P1U0 126 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 PRB1P04280 392 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 NTM-AS1Q6ZSK4 140 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 PROK2Q9HC23 129 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 CGB7P0DN87 165 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 DEFB112Q30KQ8 113 aa6.6□□□□□ -1.35
TTC28-208ENST00000612946 SPART-AS1P0CW21 52 aa6.59□□□□□ -1.35
TTC28-208ENST00000612946 PRB2P02812 416 aaPredicted RBP6.59□□□□□ -1.35
TTC28-208ENST00000612946 BRD3OSQ6XYD6 125 aa6.59□□□□□ -1.35
TTC28-208ENST00000612946 CD164Q04900 197 aa6.59□□□□□ -1.35
TTC28-208ENST00000612946 ERC2-IT1O76042 136 aa6.59□□□□□ -1.36
TTC28-208ENST00000612946 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.36
TTC28-208ENST00000612946 AJUBAQ96IF1 538 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 COX8CQ7Z4L0 72 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 PCSK5Q92824 1860 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 A8MZ25 164 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 COL4A3Q01955 1670 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 Q8N814 137 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 LINC00467Q9BRT7 94 aa6.58□□□□□ -1.36
TTC28-208ENST00000612946 FAM30AQ9NZY2 134 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 C5orf56Q8N8D9 126 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 BPESC1Q9GZL8 116 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 PRAC2D3DTV9 90 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 Q8N6K4 173 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 DIAPH2-AS1Q14236 149 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 WIPF1O43516 503 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 H3BPC8 53 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 IGLV1-47P01700 117 aa6.57□□□□□ -1.36
TTC28-208ENST00000612946 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
TTC28-208ENST00000612946 HIGD2AQ9BW72 106 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 TSHBP01222 138 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 Q8IZM0 81 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 DKK4Q9UBT3 224 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
TTC28-208ENST00000612946 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 ZNF503-AS2A6NEH8 195 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 Q8N3U1 123 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
TTC28-208ENST00000612946 M0R378 163 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 C4orf3Q8WVX3 66 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 COL4A4P53420 1690 aaPredicted RBP6.55□□□□□ -1.36
TTC28-208ENST00000612946 A0A087WZ39 114 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 PRO0255Q9UI72 69 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 IGIPA6NJ69 53 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 WFDC10BQ8IUB3 73 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
TTC28-208ENST00000612946 CHD8Q9HCK8 2581 aa6.55□□□□□ -1.36
TTC28-208ENST00000612946 CD164L2Q6UWJ8 174 aa6.54□□□□□ -1.36
TTC28-208ENST00000612946 SPRY2O43597 315 aa6.54□□□□□ -1.36
TTC28-208ENST00000612946 C6orf99Q4VX62 202 aa6.54□□□□□ -1.36
TTC28-208ENST00000612946 LINC00208Q96KT6 92 aa6.54□□□□□ -1.36
TTC28-208ENST00000612946 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
TTC28-208ENST00000612946 SBSPONQ8IVN8 264 aa6.53□□□□□ -1.36
TTC28-208ENST00000612946 MUC22E2RYF6 1773 aaPredicted RBP6.53□□□□□ -1.36
TTC28-208ENST00000612946 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
TTC28-208ENST00000612946 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
TTC28-208ENST00000612946 REG3AQ06141 175 aa6.53□□□□□ -1.36
TTC28-208ENST00000612946 Q6ZQY7 126 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms