RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 FUSP35637 526 aaKnown RBP eCLIP14.72□□□□□ -0.05
CBWD3-207ENST00000611426 KRTDAPP60985 99 aa14.72□□□□□ -0.05
CBWD3-207ENST00000611426 LINC00173Q6ZV60 143 aa14.72□□□□□ -0.05
CBWD3-207ENST00000611426 TRBV6-4A0A1B0GX49 114 aa14.71□□□□□ -0.06
CBWD3-207ENST00000611426 I3L3M4 83 aa14.71□□□□□ -0.06
CBWD3-207ENST00000611426 DNAH10OSP0CZ25 163 aa14.71□□□□□ -0.06
CBWD3-207ENST00000611426 SH2D6Q7Z4S9 175 aa14.71□□□□□ -0.06
CBWD3-207ENST00000611426 SYS1-DBNDD2H3BUS1 97 aa14.7□□□□□ -0.06
CBWD3-207ENST00000611426 PET117Q6UWS5 81 aa14.7□□□□□ -0.06
CBWD3-207ENST00000611426 MAP1LC3CQ9BXW4 147 aa14.7□□□□□ -0.06
CBWD3-207ENST00000611426 CDPF1Q6NVV7 123 aa14.69□□□□□ -0.06
CBWD3-207ENST00000611426 TOMM6Q96B49 74 aa14.69□□□□□ -0.06
CBWD3-207ENST00000611426 A0A087WTM6 91 aa14.68□□□□□ -0.06
CBWD3-207ENST00000611426 ATP5LO75964 103 aa14.68□□□□□ -0.06
CBWD3-207ENST00000611426 TSHBP01222 138 aa14.68□□□□□ -0.06
CBWD3-207ENST00000611426 IFI27L1Q96BM0 104 aa14.68□□□□□ -0.06
CBWD3-207ENST00000611426 SCGB1D1O95968 90 aa14.67□□□□□ -0.06
CBWD3-207ENST00000611426 TEX43Q6ZNM6 134 aa14.67□□□□□ -0.06
CBWD3-207ENST00000611426 C10orf126Q8N4M7 172 aa14.67□□□□□ -0.06
CBWD3-207ENST00000611426 SLC25A29Q8N8R3 303 aa14.67□□□□□ -0.06
CBWD3-207ENST00000611426 TRBV7-3A0A075B6L6 115 aa14.66□□□□□ -0.06
CBWD3-207ENST00000611426 Q9UF83 564 aa14.66□□□□□ -0.06
CBWD3-207ENST00000611426 TIRAPP58753 221 aa14.65□□□□□ -0.06
CBWD3-207ENST00000611426 RPL36AP83881 106 aaKnown RBP14.65□□□□□ -0.06
CBWD3-207ENST00000611426 LINC01545Q5VT33 79 aa14.65□□□□□ -0.06
CBWD3-207ENST00000611426 C2orf66Q6UXQ4 117 aa14.65□□□□□ -0.06
CBWD3-207ENST00000611426 RPL36ALQ969Q0 106 aaKnown RBP14.65□□□□□ -0.06
CBWD3-207ENST00000611426 PRADC1Q9BSG0 188 aa14.65□□□□□ -0.06
CBWD3-207ENST00000611426 IGHV3-38A0A0C4DH36 116 aa14.64□□□□□ -0.07
CBWD3-207ENST00000611426 C20orf202A1L168 122 aa14.64□□□□□ -0.07
CBWD3-207ENST00000611426 CYSLTR1Q9Y271 337 aa14.64□□□□□ -0.07
CBWD3-207ENST00000611426 LINC00694P0DN24 101 aa14.63□□□□□ -0.07
CBWD3-207ENST00000611426 UBE2D3P61077 147 aa14.63□□□□□ -0.07
CBWD3-207ENST00000611426 UBE2D2P62837 147 aa14.63□□□□□ -0.07
CBWD3-207ENST00000611426 TRAV8-6A0A0B4J262 113 aa14.62□□□□□ -0.07
CBWD3-207ENST00000611426 ERASQ7Z444 233 aa14.62□□□□□ -0.07
CBWD3-207ENST00000611426 DAZ4Q86SG3 579 aaKnown RBP14.62□□□□□ -0.07
CBWD3-207ENST00000611426 DAZ3Q9NR90 486 aaKnown RBP14.62□□□□□ -0.07
CBWD3-207ENST00000611426 C20orf203Q8NBC4 194 aa14.61□□□□□ -0.07
CBWD3-207ENST00000611426 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
CBWD3-207ENST00000611426 LINC01556Q5JQF7 62 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 IGIPA6NJ69 53 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 EPM2AB3EWF7 344 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-207ENST00000611426 PSCAO43653 123 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 NPSP0C0P6 89 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 S100A12P80511 92 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 SCGB3A1Q96QR1 104 aa14.6□□□□□ -0.07
CBWD3-207ENST00000611426 XGP55808 180 aa14.59□□□□□ -0.07
CBWD3-207ENST00000611426 KRTAP10-1P60331 282 aa14.59□□□□□ -0.07
CBWD3-207ENST00000611426 COTL1Q14019 142 aa14.59□□□□□ -0.07
CBWD3-207ENST00000611426 TMEM141Q96I45 108 aa14.59□□□□□ -0.07
CBWD3-207ENST00000611426 TRAV12-1A0A0B4J245 112 aa14.58□□□□□ -0.08
CBWD3-207ENST00000611426 IBA57-AS1B1ANH7 110 aa14.58□□□□□ -0.08
CBWD3-207ENST00000611426 GTSF1LQ9H1H1 148 aa14.58□□□□□ -0.08
CBWD3-207ENST00000611426 PYGO1Q9Y3Y4 419 aa14.58□□□□□ -0.08
CBWD3-207ENST00000611426 GCSHP23434 173 aa14.57□□□□□ -0.08
CBWD3-207ENST00000611426 LELP1Q5T871 98 aa14.57□□□□□ -0.08
CBWD3-207ENST00000611426 ATP6V0E2Q8NHE4 81 aa14.57□□□□□ -0.08
CBWD3-207ENST00000611426 CHCHD7Q9BUK0 85 aa14.57□□□□□ -0.08
CBWD3-207ENST00000611426 IGHV3-30P01768 117 aa14.56□□□□□ -0.08
CBWD3-207ENST00000611426 IGHV3-33P01772 117 aa14.56□□□□□ -0.08
CBWD3-207ENST00000611426 IGHV3-30-3P0DP02 117 aa14.56□□□□□ -0.08
CBWD3-207ENST00000611426 IGHV3-30-5P0DP03 117 aa14.56□□□□□ -0.08
CBWD3-207ENST00000611426 ODF1Q14990 250 aa14.55□□□□□ -0.08
CBWD3-207ENST00000611426 Q9HAA7 133 aa14.55□□□□□ -0.08
CBWD3-207ENST00000611426 GAGE12JA6NER3 117 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 RPL39P62891 51 aaKnown RBP14.54□□□□□ -0.08
CBWD3-207ENST00000611426 GAGE1Q13065 139 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 GAGE4Q13068 117 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 GAGE5Q13069 117 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 GAGE13Q4V321 117 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 TIMM21Q9BVV7 248 aa14.54□□□□□ -0.08
CBWD3-207ENST00000611426 LRCOL1A6NCL2 159 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 PRSS1P07477 247 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 TMEM97Q5BJF2 176 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 Q6ZN92 141 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 VAMP8Q9BV40 100 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 SPANXA1Q9NS26 97 aa14.53□□□□□ -0.08
CBWD3-207ENST00000611426 FAT1Q14517 4588 aa14.52□□□□□ -0.08
CBWD3-207ENST00000611426 A0A087WX48 190 aa14.52□□□□□ -0.08
CBWD3-207ENST00000611426 IGLV5-52A0A0A0MRZ9 124 aa14.52□□□□□ -0.08
CBWD3-207ENST00000611426 ZNF664Q8N3J9 261 aa14.52□□□□□ -0.08
CBWD3-207ENST00000611426 BAALCQ8WXS3 180 aa14.52□□□□□ -0.08
CBWD3-207ENST00000611426 VPS13BQ7Z7G8 4022 aa14.51□□□□□ -0.09
CBWD3-207ENST00000611426 PKIAP61925 76 aa14.5□□□□□ -0.09
CBWD3-207ENST00000611426 NTM-AS1Q6ZSK4 140 aa14.5□□□□□ -0.09
CBWD3-207ENST00000611426 NTN5Q8WTR8 489 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-207ENST00000611426 H0Y8G0 127 aa14.49□□□□□ -0.09
CBWD3-207ENST00000611426 H7C423 109 aa14.49□□□□□ -0.09
CBWD3-207ENST00000611426 PAPPA-AS1Q5QFB9 102 aa14.49□□□□□ -0.09
CBWD3-207ENST00000611426 MRPL52Q86TS9 123 aaKnown RBP14.49□□□□□ -0.09
CBWD3-207ENST00000611426 DEFB104AQ8WTQ1 72 aa14.49□□□□□ -0.09
CBWD3-207ENST00000611426 INAFM2P0DMQ5 153 aa14.48□□□□□ -0.09
CBWD3-207ENST00000611426 Q5VSD8 79 aa14.48□□□□□ -0.09
CBWD3-207ENST00000611426 Q8N814 137 aa14.48□□□□□ -0.09
CBWD3-207ENST00000611426 UBE2D4Q9Y2X8 147 aa14.48□□□□□ -0.09
CBWD3-207ENST00000611426 CSDC2Q9Y534 153 aaKnown RBP14.48□□□□□ -0.09
CBWD3-207ENST00000611426 F8VRH5 84 aa14.47□□□□□ -0.09
CBWD3-207ENST00000611426 MRPS36P82909 103 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms