RNA–Protein interactions for RNA: ENST00000609972.1

RGPD4-AS1-206, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 5

Gene RGPD4-AS1, Length 393 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-206ENST00000609972 TSLPQ969D9 159 aa0.26□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 SMG6Q86US8 1419 aaKnown RBP0.26□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 C2CD3Q4AC94 2353 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 KIF21AQ7Z4S6 1674 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 BIVM-ERCC5R4GMW8 1640 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 TRAV22A0A0B4J277 110 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 UBE2L5PA0A1B0GUS4 154 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 IGLC7A0M8Q6 106 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 FAM24AA6NFZ4 105 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 UBE2L3P68036 154 aaKnown RBP0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 LINC01558Q9Y6Z2 57 aa0.25□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 HMGN4O00479 90 aa0.24□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 CFDP00746 253 aaPredicted RBP0.24□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 GNG4P50150 75 aa0.24□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 ATP5EP56381 51 aaPredicted RBP0.24□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 TMEM203Q969S6 136 aa0.24□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 MYOM2P54296 1465 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 CORTO00230 105 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 DOPEY2Q9Y3R5 2298 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 CUL7Q14999 1698 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 ROBO1Q9Y6N7 1651 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 ERCC6L2Q5T890 1561 aa0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 DMBT1Q9UGM3 2413 aaPredicted RBP0.23□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 F6UZH7 168 aa0.22□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 M0R3E3 92 aa0.22□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 C2orf88Q9BSF0 95 aa0.22□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 LRP6O75581 1613 aa0.22□□□□□ -2.37
RGPD4-AS1-206ENST00000609972 RIMS1Q86UR5 1692 aaKnown RBP0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 NHSL1Q5SYE7 1610 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 EIF4G3O43432 1585 aaKnown RBP0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 BCE1O60756 84 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 DPH3P1Q9H4G8 78 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 LINC00474Q9P2X8 69 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 UQCR10Q9UDW1 63 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 ZNF292O60281 2723 aa0.21□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 MYO7BQ6PIF6 2116 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 PPP3R1P63098 170 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 MRPS10P82664 201 aaKnown RBP0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 Q6JHZ5 121 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 Q8IZM0 81 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 SVBPQ8N300 66 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 GNG8Q9UK08 70 aa0.2□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 SHANK2Q9UPX8 1470 aa0.19□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 SFT2D2O95562 160 aa0.19□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 DCDP81605 110 aaKnown RBP0.19□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 WFDC2Q14508 124 aa0.19□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 WDR7Q9Y4E6 1490 aa0.18□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 CHKB-CPT1BH3BT56 60 aa0.18□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 TP53AIP1Q9HCN2 124 aa0.18□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 PTPRQQ9UMZ3 2332 aa0.18□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 CELSR1Q9NYQ6 3014 aa0.17□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 UBR5O95071 2799 aaPredicted RBP0.17□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 SHROOM2Q13796 1616 aa0.16□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 RAPGEF6Q8TEU7 1601 aa0.16□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 MYOM1P52179 1685 aa0.16□□□□□ -2.38
RGPD4-AS1-206ENST00000609972 C10orf71Q711Q0 1435 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 MGPP08493 103 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 S100A1P23297 94 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 GNG11P61952 73 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 NXT2Q9NPJ8 142 aaKnown RBP0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 USF3Q68DE3 2245 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 WNK2Q9Y3S1 2297 aa0.15□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 MAPKBP1O60336 1514 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 LAMC1P11047 1609 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 WHAMMP3Q1A5X7 153 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 FAM167A-AS1Q96KT0 104 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 CDC42SE2Q9NRR3 84 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 GOLGA4Q13439 2230 aaKnown RBP0.14□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 Q5VSD8 79 aa0.13□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 LINC00587B1AMM8 73 aa0.12□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 PIGYQ3MUY2 71 aa0.12□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 ABCA2Q9BZC7 2435 aa0.12□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 BTAF1O14981 1849 aa0.11□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 H3BQ15 152 aa0.11□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 DEFB109BQ30KR1 87 aa0.11□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 SCAPERQ9BY12 1400 aa0.11□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 NRKQ7Z2Y5 1582 aa0.11□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 TMEM263Q8WUH6 116 aaKnown RBP0.1□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 FAM135AQ9P2D6 1515 aa0.09□□□□□ -2.39
RGPD4-AS1-206ENST00000609972 TRBV6-1A0A0K0K1D8 114 aa0.09□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 NAP1L6A6NFF2 107 aa0.09□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 I3L2K1 104 aa0.09□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 IGLC1P0CG04 106 aa0.09□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 COX6CP09669 75 aa0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 GTF2H5Q6ZYL4 71 aa0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 SPRR4Q96PI1 79 aa0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 ARL2-SNX15V9GYD0 113 aa0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 NCOR1O75376 2440 aa0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 PPRC1Q5VV67 1664 aaKnown RBP0.08□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 MANBALQ9NQG1 85 aa0.07□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 TET3O43151 1660 aa0.07□□□□□ -2.4
RGPD4-AS1-206ENST00000609972 KDM5AP29375 1690 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms